org.bdgenomics.adam.models

# SequenceDictionary

#### class SequenceDictionary extends Serializable

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### Instance Constructors

1. #### new SequenceDictionary()

2. #### new SequenceDictionary(records: Vector[SequenceRecord])

### Value Members

1. #### final def !=(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

2. #### final def ##(): Int

   Definition Classes
     AnyRef → Any

3. #### def +(record: SequenceRecord): SequenceDictionary

4. #### def ++(that: SequenceDictionary): SequenceDictionary

5. #### final def ==(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

6. #### def apply(name: String): Option[SequenceRecord]

7. #### final def asInstanceOf[T0]: T0

   Definition Classes
     Any

8. #### def clone(): AnyRef

   Attributes
     protected[java.lang]
   Definition Classes
     AnyRef
   Annotations
     @throws( ... )

9. #### def containsRefName(name: String): Boolean

10. #### final def eq(arg0: AnyRef): Boolean

    Definition Classes
      AnyRef

11. #### def equals(o: Any): Boolean

    Definition Classes
      SequenceDictionary → AnyRef → Any

12. #### def finalize(): Unit

    Attributes
      protected[java.lang]
    Definition Classes
      AnyRef
    Annotations
      @throws( classOf[java.lang.Throwable] )

13. #### final def getClass(): Class[_]

    Definition Classes
      AnyRef → Any

14. #### def hashCode(): Int

    Definition Classes
      SequenceDictionary → AnyRef → Any

15. #### def isCompatibleWith(that: SequenceDictionary): Boolean

16. #### final def isInstanceOf[T0]: Boolean

    Definition Classes
      Any

17. #### final def ne(arg0: AnyRef): Boolean

    Definition Classes
      AnyRef

18. #### final def notify(): Unit

    Definition Classes
      AnyRef

19. #### final def notifyAll(): Unit

    Definition Classes
      AnyRef

20. #### val records: Vector[SequenceRecord]

21. #### final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
      AnyRef

22. #### def toSAMSequenceDictionary: SAMSequenceDictionary

    Converts this ADAM style sequence dictionary into a SAM style sequence dictionary.

    Converts this ADAM style sequence dictionary into a SAM style sequence dictionary.

    returns

      Returns a SAM formatted sequence dictionary.

23. #### def toString(): String

    Definition Classes
      SequenceDictionary → AnyRef → Any

24. #### final def wait(): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

25. #### final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

26. #### final def wait(arg0: Long): Unit

    Definition Classes
      AnyRef
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      @throws( ... )

### Inherited from Serializable

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### Inherited from Any

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