org.bdgenomics.adam.rdd.read.recalibration

# CovariateKey

#### class CovariateKey extends Serializable

Represents a tuple containing a value for each covariate.

The values for mandatory covariates are stored in member fields and optional covariate values are in `extras`.

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### Instance Constructors

1. #### new CovariateKey(readGroup: String, quality: QualityScore, extras: Seq[Option[Value]])

### Value Members

1. #### final def !=(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

2. #### final def ##(): Int

   Definition Classes
     AnyRef → Any

3. #### final def ==(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

4. #### final def asInstanceOf[T0]: T0

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5. #### def clone(): AnyRef

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     protected[java.lang]
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   Annotations
     @throws( ... )

6. #### def containsNone: Boolean

7. #### final def eq(arg0: AnyRef): Boolean

   Definition Classes
     AnyRef

8. #### def equals(other: Any): Boolean

   Definition Classes
     CovariateKey → AnyRef → Any

9. #### val extras: Seq[Option[Value]]

10. #### def finalize(): Unit

    Attributes
      protected[java.lang]
    Definition Classes
      AnyRef
    Annotations
      @throws( classOf[java.lang.Throwable] )

11. #### final def getClass(): Class[_]

    Definition Classes
      AnyRef → Any

12. #### val hashCode: Int

    Definition Classes
      CovariateKey → AnyRef → Any

13. #### final def isInstanceOf[T0]: Boolean

    Definition Classes
      Any

14. #### final def ne(arg0: AnyRef): Boolean

    Definition Classes
      AnyRef

15. #### final def notify(): Unit

    Definition Classes
      AnyRef

16. #### final def notifyAll(): Unit

    Definition Classes
      AnyRef

17. #### val quality: QualityScore

18. #### val readGroup: String

19. #### final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
      AnyRef

20. #### def toString(): String

    Definition Classes
      CovariateKey → AnyRef → Any

21. #### final def wait(): Unit

    Definition Classes
      AnyRef
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      @throws( ... )

22. #### final def wait(arg0: Long, arg1: Int): Unit

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      @throws( ... )

23. #### final def wait(arg0: Long): Unit

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      @throws( ... )

### Inherited from Serializable

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