org.bdgenomics.adam.rdd

# ADAMContext

#### object ADAMContext extends Serializable

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### Value Members

1. #### final def !=(arg0: Any): Boolean

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2. #### final def ##(): Int

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3. #### final def ==(arg0: Any): Boolean

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4. #### final def asInstanceOf[T0]: T0

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5. #### def clone(): AnyRef

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6. #### implicit def convertBaseFeatureRDDToFeatureRDD(rdd: RDD[Feature]): FeatureRDDFunctions

7. #### final def eq(arg0: AnyRef): Boolean

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8. #### def equals(arg0: Any): Boolean

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9. #### def finalize(): Unit

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10. #### final def getClass(): Class[_]

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11. #### def hashCode(): Int

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12. #### implicit def intListToJavaIntegerList(list: List[Int]): List[Integer]

13. #### final def isInstanceOf[T0]: Boolean

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14. #### implicit def iterableToJavaCollection[A](i: Iterable[A]): Collection[A]

15. #### implicit def javaListToList[A](list: List[A]): List[A]

16. #### implicit def javaMapToMap[A, B](map: Map[A, B]): Map[A, B]

17. #### implicit def javaSetToSet[A](set: Set[A]): Set[A]

18. #### implicit def listToJavaList[A](list: List[A]): List[A]

19. #### implicit def mapToJavaMap[A, B](map: Map[A, B]): Map[A, B]

20. #### final def ne(arg0: AnyRef): Boolean

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21. #### final def notify(): Unit

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22. #### final def notifyAll(): Unit

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23. #### implicit def rddToADAMGenotypeRDD(rdd: RDD[Genotype]): GenotypeRDDFunctions

24. #### implicit def rddToADAMRDD[T](rdd: RDD[T])(implicit ev1: (T) ⇒ IndexedRecord, ev2: Manifest[T]): ADAMRDDFunctions[T]

25. #### implicit def rddToADAMRecordRDD(rdd: RDD[AlignmentRecord]): AlignmentRecordRDDFunctions

26. #### implicit def rddToContigFragmentRDD(rdd: RDD[NucleotideContigFragment]): NucleotideContigFragmentRDDFunctions

27. #### implicit def rddToFragmentRDD(rdd: RDD[Fragment]): FragmentRDDFunctions

28. #### implicit def rddToVariantContextRDD(rdd: RDD[VariantContext]): VariantContextRDDFunctions

29. #### implicit def recordToRichRecord(record: AlignmentRecord): RichAlignmentRecord

30. #### implicit def setToJavaSet[A](set: Set[A]): Set[A]

31. #### implicit def sparkContextToADAMContext(sc: SparkContext): ADAMContext

32. #### final def synchronized[T0](arg0: ⇒ T0): T0

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33. #### def toString(): String

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34. #### final def wait(): Unit

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35. #### final def wait(arg0: Long, arg1: Int): Unit

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36. #### final def wait(arg0: Long): Unit

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