ADAMContext

Value Members

1. final def !=(arg0: Any): Boolean

   

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2. final def ##(): Int

   

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3. final def ==(arg0: Any): Boolean

   

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4. final def asInstanceOf[T0]: T0

   

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5. def clone(): AnyRef

   

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6. implicit def convertBaseFeatureRDDToFeatureRDD(rdd: RDD[Feature]): FeatureRDDFunctions

   

7. final def eq(arg0: AnyRef): Boolean

   

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8. def equals(arg0: Any): Boolean

   

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9. def finalize(): Unit

   

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10. implicit def genomicRDDToRDD[T](gRdd: GenomicRDD[T]): RDD[T]

    

11. final def getClass(): Class[_]

    

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12. def hashCode(): Int

    

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13. implicit def intListToJavaIntegerList(list: List[Int]): List[Integer]

    

14. final def isInstanceOf[T0]: Boolean

    

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15. implicit def iterableToJavaCollection[A](i: Iterable[A]): Collection[A]

    

16. implicit def javaListToList[A](list: List[A]): List[A]

    

17. implicit def javaMapToMap[A, B](map: Map[A, B]): Map[A, B]

    

18. implicit def javaSetToSet[A](set: Set[A]): Set[A]

    

19. implicit def listToJavaList[A](list: List[A]): List[A]

    

20. implicit def mapToJavaMap[A, B](map: Map[A, B]): Map[A, B]

    

21. final def ne(arg0: AnyRef): Boolean

    

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22. final def notify(): Unit

    

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23. final def notifyAll(): Unit

    

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24. implicit def rddToADAMGenotypeRDD(rdd: RDD[Genotype]): GenotypeRDDFunctions

    

25. implicit def rddToADAMRDD[T](rdd: RDD[T])(implicit ev1: (T) ⇒ IndexedRecord, ev2: Manifest[T]): ADAMRDDFunctions[T]

    

26. implicit def rddToADAMRecordRDD(rdd: RDD[AlignmentRecord]): AlignmentRecordRDDFunctions

    

27. implicit def rddToContigFragmentRDD(rdd: RDD[NucleotideContigFragment]): NucleotideContigFragmentRDDFunctions

    

28. implicit def rddToFragmentRDD(rdd: RDD[Fragment]): FragmentRDDFunctions

    

29. implicit def rddToVariantContextRDD(rdd: RDD[VariantContext]): VariantContextRDDFunctions

    

30. implicit def recordToRichRecord(record: AlignmentRecord): RichAlignmentRecord

    

31. implicit def setToJavaSet[A](set: Set[A]): Set[A]

    

32. implicit def sparkContextToADAMContext(sc: SparkContext): ADAMContext

    

33. final def synchronized[T0](arg0: ⇒ T0): T0

    

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34. def toString(): String

    

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35. final def wait(): Unit

    

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36. final def wait(arg0: Long, arg1: Int): Unit

    

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37. final def wait(arg0: Long): Unit

    

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