org.bdgenomics.adam.rdd

# InnerTreeRegionJoin

###
Related Doc: package rdd

#### case class InnerTreeRegionJoin[T, U]()(implicit evidence$1: ClassTag[T], evidence$2: ClassTag[U]) extends RegionJoin[T, U, T, U] with TreeRegionJoin[T, U] with Product with Serializable

Implements an inner region join where the left side of the join is broadcast.

Linear Supertypes
Product, Equals, TreeRegionJoin[T, U], RegionJoin[T, U, T, U], Serializable, Serializable, AnyRef, Any
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Inherited

1. InnerTreeRegionJoin
2. Product
3. Equals
4. TreeRegionJoin
5. RegionJoin
6. Serializable
7. Serializable
8. AnyRef
9. Any

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Visibility

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### Instance Constructors

1. #### new InnerTreeRegionJoin()(implicit arg0: ClassTag[T], arg1: ClassTag[U])

### Value Members

1. #### final def !=(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

2. #### final def ##(): Int

   Definition Classes
     AnyRef → Any

3. #### final def ==(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

4. #### final def asInstanceOf[T0]: T0

   Definition Classes
     Any

5. #### def broadcastAndJoin(tree: IntervalArray[ReferenceRegion, T], joinedRDD: RDD[(ReferenceRegion, U)]): RDD[(T, U)]

6. #### def clone(): AnyRef

   Attributes
     protected[java.lang]
   Definition Classes
     AnyRef
   Annotations
     @throws( ... )

7. #### final def eq(arg0: AnyRef): Boolean

   Definition Classes
     AnyRef

8. #### def finalize(): Unit

   Attributes
     protected[java.lang]
   Definition Classes
     AnyRef
   Annotations
     @throws( classOf[java.lang.Throwable] )

9. #### final def getClass(): Class[_]

   Definition Classes
     AnyRef → Any

10. #### final def isInstanceOf[T0]: Boolean

    Definition Classes
      Any

11. #### final def ne(arg0: AnyRef): Boolean

    Definition Classes
      AnyRef

12. #### final def notify(): Unit

    Definition Classes
      AnyRef

13. #### final def notifyAll(): Unit

    Definition Classes
      AnyRef

14. #### def partitionAndJoin(baseRDD: RDD[(ReferenceRegion, T)], joinedRDD: RDD[(ReferenceRegion, U)]): RDD[(T, U)]

    Performs an inner region join between two RDDs.

    Performs an inner region join between two RDDs.

    baseRDD

      The 'left' side of the join

    joinedRDD

      The 'right' side of the join

    returns

      An RDD of pairs (x, y), where x is from baseRDD, y is from joinedRDD, and the region corresponding to x overlaps the region corresponding to y.

    Definition Classes
      InnerTreeRegionJoin → RegionJoin

15. #### final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
      AnyRef

16. #### final def wait(): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

17. #### final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

18. #### final def wait(arg0: Long): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

### Inherited from Product

### Inherited from Equals

### Inherited from TreeRegionJoin[T, U]

### Inherited from RegionJoin[T, U, T, U]

### Inherited from Serializable

### Inherited from AnyRef

### Inherited from Any

### Ungrouped