Object

org.bdgenomics.adam.projections

GenotypeField

Related Doc: package projections

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object GenotypeField extends FieldEnumeration

Enumeration of Genotype field names for predicates and projections.

Linear Supertypes
FieldEnumeration, Enumeration, Serializable, Serializable, AnyRef, Any
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  1. GenotypeField
  2. FieldEnumeration
  3. Enumeration
  4. Serializable
  5. Serializable
  6. AnyRef
  7. Any
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Type Members

  1. class SchemaVal extends Val with FieldValue

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    An enumerated field that is part of this schema.

    An enumerated field that is part of this schema.

    Definition Classes
    FieldEnumeration

  2. class Val extends Value with Serializable

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    Attributes
    protected
    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID()

  3. abstract class Value extends Ordered[Value] with Serializable

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    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID()

  4. class ValueSet extends AbstractSet[Value] with SortedSet[Value] with SortedSetLike[Value, ValueSet] with Serializable

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    Definition Classes
    Enumeration

Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any

  3. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  4. final def SchemaValue: SchemaVal

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    Attributes
    protected
    Definition Classes
    FieldEnumeration

  5. final def Value(i: Int, name: String): Value

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    Attributes
    protected
    Definition Classes
    Enumeration

  6. final def Value(name: String): Value

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    Attributes
    protected
    Definition Classes
    Enumeration

  7. final def Value(i: Int): Value

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    Attributes
    protected
    Definition Classes
    Enumeration

  8. final def Value: Value

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    Attributes
    protected
    Definition Classes
    Enumeration

  9. val alleles: SchemaVal

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  10. val alternateReadDepth: SchemaVal

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  11. final def apply(x: Int): Value

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    Definition Classes
    Enumeration

  12. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any

  13. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  14. val contigName: SchemaVal

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  15. val end: SchemaVal

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  16. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  17. def equals(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  18. val expectedAlleleDosage: SchemaVal

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  19. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  20. val genotypeLikelihoods: SchemaVal

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  21. val genotypeQuality: SchemaVal

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  22. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any

  23. def hashCode(): Int

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    Definition Classes
    AnyRef → Any

  24. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any

  25. final def maxId: Int

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    Definition Classes
    Enumeration

  26. val minReadDepth: SchemaVal

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  27. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  28. var nextId: Int

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    Attributes
    protected
    Definition Classes
    Enumeration

  29. var nextName: Iterator[String]

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    Attributes
    protected
    Definition Classes
    Enumeration

  30. val nonReferenceLikelihoods: SchemaVal

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  31. final def notify(): Unit

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    Definition Classes
    AnyRef

  32. final def notifyAll(): Unit

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    Definition Classes
    AnyRef

  33. val phaseQuality: SchemaVal

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  34. val phaseSetId: SchemaVal

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  35. val phased: SchemaVal

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  36. val processingDescription: SchemaVal

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  37. val readDepth: SchemaVal

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  38. def readResolve(): AnyRef

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    Attributes
    protected
    Definition Classes
    Enumeration

  39. val recordSchema: Schema

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    The schema that this enumeration represents.

    The schema that this enumeration represents.

    Definition Classes
    FieldEnumeration

  40. val referenceReadDepth: SchemaVal

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  41. val sampleDescription: SchemaVal

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  42. val sampleId: SchemaVal

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  43. val splitFromMultiAllelic: SchemaVal

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  44. val start: SchemaVal

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  45. val strandBiasComponents: SchemaVal

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  46. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef

  47. def toString(): String

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    Definition Classes
    Enumeration → AnyRef → Any

  48. def values: ValueSet

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    Definition Classes
    Enumeration

  49. val variant: SchemaVal

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  50. val variantCallingAnnotations: SchemaVal

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  51. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  52. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  53. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  54. final def withName(s: String): Value

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    Definition Classes
    Enumeration

Inherited from FieldEnumeration

Inherited from Enumeration

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

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