org.bdgenomics.adam.api.java

# ContigsToVariantsDatasetConverter

###
Related Doc: package java

#### final class ContigsToVariantsDatasetConverter extends ToVariantDatasetConversion[NucleotideContigFragment, NucleotideContigFragmentRDD]

Linear Supertypes
ToVariantDatasetConversion[NucleotideContigFragment, NucleotideContigFragmentRDD], GenomicDatasetConversion[NucleotideContigFragment, NucleotideContigFragmentRDD, Variant, VariantRDD], Function2[NucleotideContigFragmentRDD, Dataset[Variant], VariantRDD], Serializable, AnyRef, Any
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Inherited

1. ContigsToVariantsDatasetConverter
2. ToVariantDatasetConversion
3. GenomicDatasetConversion
4. Function2
5. Serializable
6. AnyRef
7. Any

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Visibility

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### Instance Constructors

1. #### new ContigsToVariantsDatasetConverter()

### Value Members

1. #### final def !=(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

2. #### final def ##(): Int

   Definition Classes
     AnyRef → Any

3. #### final def ==(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

4. #### final def asInstanceOf[T0]: T0

   Definition Classes
     Any

5. #### def call(v1: NucleotideContigFragmentRDD, v2: Dataset[Variant]): VariantRDD

   Definition Classes
     ContigsToVariantsDatasetConverter → GenomicDatasetConversion → Function2

6. #### def clone(): AnyRef

   Attributes
     protected[java.lang]
   Definition Classes
     AnyRef
   Annotations
     @throws( ... )

7. #### final def eq(arg0: AnyRef): Boolean

   Definition Classes
     AnyRef

8. #### def equals(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

9. #### def finalize(): Unit

   Attributes
     protected[java.lang]
   Definition Classes
     AnyRef
   Annotations
     @throws( classOf[java.lang.Throwable] )

10. #### final def getClass(): Class[_]

    Definition Classes
      AnyRef → Any

11. #### def hashCode(): Int

    Definition Classes
      AnyRef → Any

12. #### final def isInstanceOf[T0]: Boolean

    Definition Classes
      Any

13. #### final def ne(arg0: AnyRef): Boolean

    Definition Classes
      AnyRef

14. #### final def notify(): Unit

    Definition Classes
      AnyRef

15. #### final def notifyAll(): Unit

    Definition Classes
      AnyRef

16. #### final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
      AnyRef

17. #### def toString(): String

    Definition Classes
      AnyRef → Any

18. #### final def wait(): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

19. #### final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

20. #### final def wait(arg0: Long): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

21. #### val xTag: scala.reflect.api.JavaUniverse.TypeTag[Variant]

    Definition Classes
      ToVariantDatasetConversion → GenomicDatasetConversion

### Inherited from ToVariantDatasetConversion[NucleotideContigFragment, NucleotideContigFragmentRDD]

### Inherited from GenomicDatasetConversion[NucleotideContigFragment, NucleotideContigFragmentRDD, Variant, VariantRDD]

### Inherited from Function2[NucleotideContigFragmentRDD, Dataset[Variant], VariantRDD]

### Inherited from Serializable

### Inherited from AnyRef

### Inherited from Any

### Ungrouped