MergeDiscovered
cli
MergeDiscoveredArgs
cli
maxHetIndelAltAllelicFraction
BiallelicGenotyperArgs TrioGenotyperArgs
maxHetSnpAltAllelicFraction
BiallelicGenotyperArgs TrioGenotyperArgs
maxIndelDepth
BiallelicGenotyperArgs TrioGenotyperArgs
maxIndelPhredStrandBias
BiallelicGenotyperArgs TrioGenotyperArgs
maxSnpDepth
BiallelicGenotyperArgs TrioGenotyperArgs
maxSnpPhredStrandBias
BiallelicGenotyperArgs TrioGenotyperArgs
minHetIndelAltAllelicFraction
BiallelicGenotyperArgs TrioGenotyperArgs
minHetIndelQualityByDepth
BiallelicGenotyperArgs TrioGenotyperArgs
minHetSnpAltAllelicFraction
BiallelicGenotyperArgs TrioGenotyperArgs
minHetSnpQualityByDepth
BiallelicGenotyperArgs TrioGenotyperArgs
minHomIndelAltAllelicFraction
BiallelicGenotyperArgs TrioGenotyperArgs
minHomIndelQualityByDepth
BiallelicGenotyperArgs TrioGenotyperArgs
minHomSnpAltAllelicFraction
BiallelicGenotyperArgs TrioGenotyperArgs
minHomSnpQualityByDepth
BiallelicGenotyperArgs TrioGenotyperArgs
minIndelDepth
BiallelicGenotyperArgs TrioGenotyperArgs
minIndelRMSMappingQuality
BiallelicGenotyperArgs TrioGenotyperArgs
minMappingQuality
BiallelicGenotyperArgs TrioGenotyperArgs
minObservationsForDiscovery
BiallelicGenotyperArgs DiscoverVariantsArgs TrioGenotyperArgs
minPhredForDiscovery
BiallelicGenotyperArgs DiscoverVariantsArgs TrioGenotyperArgs
minQuality
BiallelicGenotyperArgs TrioGenotyperArgs
minSnpDepth
BiallelicGenotyperArgs TrioGenotyperArgs
minSnpRMSMappingQuality
BiallelicGenotyperArgs TrioGenotyperArgs