Aligner
realigner
AvocadoKryoRegistrator
serialization
align
Aligner
alleleCoverage
Observation
alleleForwardStrand
Observation
alleleLogLikelihoods
Observation
alternateAllele
DiscoveredVariant
apply
JointAnnotatorCaller
SquareOffReferenceModel
TrioCaller
Observation
PrefilterReads
RewriteHets
autosomalOnly
PrefilterReadsArgs
avocado
bdgenomics