Uses of Package
org.biopax.paxtools.pattern.miner

Packages that use org.biopax.paxtools.pattern.miner

Package	Description
org.biopax.paxtools.pattern.constraint	Package for constraints.
org.biopax.paxtools.pattern.miner	Package for pattern miner utility.

Classes in org.biopax.paxtools.pattern.miner used by org.biopax.paxtools.pattern.constraint

Class and Description
IDFetcher

Classes in org.biopax.paxtools.pattern.miner used by org.biopax.paxtools.pattern.miner

Class and Description
AbstractSIFMiner Base class for SIF Miners.
ConfigurableIDFetcher Tries to get preferred type IDs of an entity reference.
ConsumptionControlledByMiner Miner for the consumption-controlled-by pattern.
ControlsExpressionMiner Miner for the transcriptional regulation pattern.
ControlsStateChangeOfMiner Miner for the controls-state-change pattern.
IDFetcher
Miner A miner provides a pattern to mine, and knows how to use the result set to prepare the text output.
MinerAdapter Adapter class for a miner.
OutputColumn.Type Type of the output column.
SIFEnum Enum for representing supported SIF edge types.
SIFInteraction
SIFMiner This interface tells that the miner supports SIF output.
SIFToText An interface for converting a SIF interaction to text.
SIFType