Package org.biopax.paxtools.pattern

Main package.

See: Description

Interface Summary

Interface	Description
Constraint	A constraint to check if a set of variables satisfy the requirements.

Class Summary

Class	Description
MappedConst	This is a mapping from a constraint to the elements in a match.
Match	A pattern match is an array of biopax elements that satisfies the list of mapped constraints in a pattern.
Pattern	A pattern is a list of mapped constraints.
PatternBox	This class contains several pattern samples.
Searcher	Searcher for searching a given pattern in a model.

Package org.biopax.paxtools.pattern Description

Main package. Contains the Pattern class, an interface for Constraint, and a Searcher that implements iterative search.