Uses of Interface
org.biopax.paxtools.pattern.miner.SIFMiner
Packages that use SIFMiner
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Uses of SIFMiner in org.biopax.paxtools.pattern.miner
Classes in org.biopax.paxtools.pattern.miner that implement SIFMinerModifier and TypeClassDescriptionclassBase class for SIF Miners.classMiner for the catalysis-precedes pattern.classMiner for the chemical-affects-protein pattern.classMiner for the chemical-affects-protein pattern.classMiner for the consumption-controlled-by pattern.classYet another miner for the controls-degradation pattern.classMiner for the transcriptional regulation pattern.classMiner for the transcriptional regulation pattern, modeled using Conversion.classMiner for the controls-phosphorylation pattern.classMiner for the controls-production-of pattern.classMiner for the controls-state-change pattern.classMiner for the controls-transport pattern.classMiner for the controls-transport-of-chemical pattern.classMiner for the controls-state-change pattern.classMiner for the controls-state-change pattern.classMiner for the controls-state-change pattern.classMiner for the controls-state-change pattern.classMiner for the degradation pattern.classMiner for the degradation pattern.classMiner for the "interacts-with" relation.classMiner for the "neighbor-of" relation.classMiner for the "reacts-with" relation.classMiner for the "used-for-production-of" relation.Methods in org.biopax.paxtools.pattern.miner that return types with arguments of type SIFMinerModifier and TypeMethodDescriptionSIFEnum.getMiners()SIFType.getMiners()Gets the list of SIFMiner classes that can search this type of SIF edge in a BioPAX model.Constructors in org.biopax.paxtools.pattern.miner with parameters of type SIFMinerModifierConstructorDescriptionSIFSearcher(IDFetcher idFetcher, SIFMiner... miners) Constructor with ID fetcher and miners.SIFSearcher(SIFMiner... miners) Constructor with miners.