Hierarchy For Package org.biopax.paxtools.pattern.miner

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • org.biopax.paxtools.pattern.miner.BlacklistGenerator
  • org.biopax.paxtools.pattern.miner.BlacklistGenerator2
  • org.biopax.paxtools.pattern.miner.BlacklistGenerator3
  • org.biopax.paxtools.pattern.miner.CommonIDFetcher (implements org.biopax.paxtools.pattern.miner.IDFetcher)
  • java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • java.awt.Container
      • java.awt.Window (implements javax.accessibility.Accessible)
        • java.awt.Frame (implements java.awt.MenuContainer)
          • javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • org.biopax.paxtools.pattern.miner.Dialog (implements java.awt.event.ActionListener, java.awt.event.KeyListener)
  • org.biopax.paxtools.pattern.miner.ConfigurableIDFetcher (implements org.biopax.paxtools.pattern.miner.IDFetcher)
  • org.biopax.paxtools.pattern.miner.CustomFormat (implements org.biopax.paxtools.pattern.miner.SIFToText)
  • org.biopax.paxtools.pattern.miner.ExtendedSIFWriter
  • org.biopax.paxtools.pattern.miner.MinerAdapter (implements org.biopax.paxtools.pattern.miner.Miner)
    • org.biopax.paxtools.pattern.miner.AbstractSIFMiner (implements org.biopax.paxtools.pattern.miner.SIFMiner)
      • org.biopax.paxtools.pattern.miner.CatalysisPrecedesMiner
      • org.biopax.paxtools.pattern.miner.ChemicalAffectsThroughBindingMiner
      • org.biopax.paxtools.pattern.miner.ChemicalAffectsThroughControlMiner
      • org.biopax.paxtools.pattern.miner.ConsumptionControlledByMiner
        • org.biopax.paxtools.pattern.miner.ControlsProductionOfMiner
      • org.biopax.paxtools.pattern.miner.ControlsDegradationIndirectMiner
      • org.biopax.paxtools.pattern.miner.ControlsExpressionMiner
        • org.biopax.paxtools.pattern.miner.ControlsExpressionWithConvMiner
      • org.biopax.paxtools.pattern.miner.ControlsStateChangeOfMiner
        • org.biopax.paxtools.pattern.miner.ControlsPhosphorylationMiner
        • org.biopax.paxtools.pattern.miner.ControlsTransportMiner
        • org.biopax.paxtools.pattern.miner.CSCOButIsParticipantMiner
        • org.biopax.paxtools.pattern.miner.CSCOThroughBindingSmallMoleculeMiner
        • org.biopax.paxtools.pattern.miner.CSCOThroughControllingSmallMoleculeMiner
      • org.biopax.paxtools.pattern.miner.ControlsTransportOfChemicalMiner
      • org.biopax.paxtools.pattern.miner.CSCOBothControllerAndParticipantMiner
      • org.biopax.paxtools.pattern.miner.CSCOThroughDegradationMiner
      • org.biopax.paxtools.pattern.miner.InComplexWithMiner
      • org.biopax.paxtools.pattern.miner.InteractsWithMiner
      • org.biopax.paxtools.pattern.miner.NeighborOfMiner
      • org.biopax.paxtools.pattern.miner.ReactsWithMiner
      • org.biopax.paxtools.pattern.miner.UsedToProduceMiner
    • org.biopax.paxtools.pattern.miner.ControlsStateChangeDetailedMiner
    • org.biopax.paxtools.pattern.miner.DirectedRelationMiner
    • org.biopax.paxtools.pattern.miner.RelatedGenesOfInteractionsMiner
    • org.biopax.paxtools.pattern.miner.UbiquitousIDMiner
  • org.biopax.paxtools.pattern.miner.OutputColumn
  • org.biopax.paxtools.pattern.miner.SIFInteraction (implements java.lang.Comparable<T>)
  • org.biopax.paxtools.pattern.miner.SIFSearcher
  • org.biopax.paxtools.pattern.miner.SimpleIDFetcher (implements org.biopax.paxtools.pattern.miner.IDFetcher)

Interface Hierarchy

• org.biopax.paxtools.pattern.miner.IDFetcher
• org.biopax.paxtools.pattern.miner.Miner
  • org.biopax.paxtools.pattern.miner.SIFMiner
• org.biopax.paxtools.pattern.miner.SIFToText
• org.biopax.paxtools.pattern.miner.SIFType

Enum Class Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)
    • org.biopax.paxtools.pattern.miner.OutputColumn.Type
    • org.biopax.paxtools.pattern.miner.SIFEnum (implements org.biopax.paxtools.pattern.miner.SIFType)