Package org.biopax.paxtools.pattern.miner

Interface SIFType

All Known Implementing Classes:
SIFEnum
public interface SIFType
Author:
Ozgun Babur

  • Method Summary

    Modifier and Type
    Method
    Description
    String
    getDescription()
    Gets the description of the SIF type.
    List<Class<? extends SIFMiner>>
    getMiners()
    Gets the list of SIFMiner classes that can search this type of SIF edge in a BioPAX model.
    String
    getTag()
    Tag of a SIF type is derived from the enum name.
    boolean
    isDirected()
    Asks if the edge is directed.

  • Method Details

    • getTag

      String getTag()
      Tag of a SIF type is derived from the enum name.
      Returns:
      tag

    • isDirected

      boolean isDirected()
      Asks if the edge is directed.
      Returns:
      true if directed

    • getDescription

      String getDescription()
      Gets the description of the SIF type.
      Returns:
      description

    • getMiners

      List<Class<? extends SIFMiner>> getMiners()
      Gets the list of SIFMiner classes that can search this type of SIF edge in a BioPAX model.
      Returns:
      SIF miners