public class ReactomeEntitySetUnificationXrefFix
extends Object
This is a class I wrote for fixing the unification xref problem in Reactome entity sets. It
reads in the model, goes over physical entities and looks for the converted from
reactome entity set comment. For each such generic entities it converts all of its unification
xrefs to relationship xrefs.
NOTE: This method is now outdated as it is easier to do this now with the new PathAccessors. I did not remove this
example, however, as it demonstrates many "low-level" operations of Paxtools.