Uses of Interface
org.biopax.paxtools.model.level2.process

Packages that use process

Package	Description
org.biopax.paxtools.model.level2	This package contains the interfaces that maps to the BioPAX level 2 specification.

Uses of process in org.biopax.paxtools.model.level2

Subinterfaces of process in org.biopax.paxtools.model.level2

Modifier and Type	Interface	Description
interface	biochemicalReaction	A conversion interaction in which one or more entities (substrates) undergo ovalent changes to become one or more other entities (products).
interface	catalysis	A control interaction in which a physical entity (a catalyst) increases the rate of a conversion interaction by lowering its activation energy.
interface	complexAssembly	A conversion interaction in which a set of physical entities, at least one being a macromolecule (e.g.
interface	control
interface	conversion
interface	interaction
interface	modulation	get controlled should be catalysis
interface	pathway
interface	physicalInteraction
interface	transport
interface	transportWithBiochemicalReaction

Methods in org.biopax.paxtools.model.level2 that return types with arguments of type process

Modifier and Type	Method	Description
Set<process>	control.getCONTROLLED()
Set<process>	pathwayStep.getSTEP_INTERACTIONS()

Methods in org.biopax.paxtools.model.level2 with parameters of type process

Modifier and Type	Method	Description
void	control.addCONTROLLED(process CONTROLLED)
void	pathwayStep.addSTEP_INTERACTIONS(process processStep)
void	control.removeCONTROLLED(process CONTROLLED)
void	pathwayStep.removeSTEP_INTERACTIONS(process processStep)

Method parameters in org.biopax.paxtools.model.level2 with type arguments of type process

Modifier and Type	Method	Description
void	control.setCONTROLLED(Set<process> CONTROLLED)
void	pathwayStep.setSTEP_INTERACTIONS(Set<process> STEP_INTERACTIONS)