sequenceFeature (Paxtools Core (BioPAX object model, I/O API, implementation and extras) 5.2.2 API)

All Superinterfaces:: BioPAXElement, Cloneable, Level2Element, Serializable, utilityClass, XReferrable

public interface sequenceFeature extends utilityClass, XReferrable

Field Summary

Fields inherited from interface org.biopax.paxtools.model.BioPAXElement
UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT
Method Summary

Modifier and Type

Method

Description

void

addFEATURE_LOCATION(sequenceLocation FEATURE_LOCATION)

void

addSYNONYMS(String SYNONYMS)

Set<sequenceLocation>

getFEATURE_LOCATION()

openControlledVocabulary

getFEATURE_TYPE()

String

getNAME()

String

getSHORT_NAME()

Set<String>

getSYNONYMS()

void

removeFEATURE_LOCATION(sequenceLocation FEATURE_LOCATION)

void

removeSYNONYMS(String SYNONYMS)

void

setFEATURE_LOCATION(Set<sequenceLocation> FEATURE_LOCATION)

void

setFEATURE_TYPE(openControlledVocabulary FEATURE_TYPE)

void

setNAME(String NAME)

void

setSHORT_NAME(String SHORT_NAME)

void

setSYNONYMS(Set<String> SYNONYMS)

Methods inherited from interface org.biopax.paxtools.model.BioPAXElement
equivalenceCode, getAnnotations, getModelInterface, getUri, isEquivalent

Methods inherited from interface org.biopax.paxtools.model.level2.Level2Element
addCOMMENT, getCOMMENT, removeCOMMENT, setCOMMENT

Methods inherited from interface org.biopax.paxtools.model.level2.XReferrable
addXREF, findCommonPublications, findCommonRelationships, findCommonUnifications, getXREF, removeXREF, setXREF

Method Details
- addFEATURE_LOCATION
  
  void addFEATURE_LOCATION(sequenceLocation FEATURE_LOCATION)
- addSYNONYMS
  
  void addSYNONYMS(String SYNONYMS)
- getFEATURE_LOCATION
  
  Set<sequenceLocation> getFEATURE_LOCATION()
- getFEATURE_TYPE
  
  openControlledVocabulary getFEATURE_TYPE()
- getNAME
  
  String getNAME()
- getSHORT_NAME
  
  String getSHORT_NAME()
- getSYNONYMS
  
  Set<String> getSYNONYMS()
- removeFEATURE_LOCATION
  
  void removeFEATURE_LOCATION(sequenceLocation FEATURE_LOCATION)
- removeSYNONYMS
  
  void removeSYNONYMS(String SYNONYMS)
- setFEATURE_LOCATION
  
  void setFEATURE_LOCATION(Set<sequenceLocation> FEATURE_LOCATION)
- setFEATURE_TYPE
  
  void setFEATURE_TYPE(openControlledVocabulary FEATURE_TYPE)
- setNAME
  
  void setNAME(String NAME)
- setSHORT_NAME
  
  void setSHORT_NAME(String SHORT_NAME)
- setSYNONYMS
  
  void setSYNONYMS(Set<String> SYNONYMS)