Package org.biopax.paxtools.query.algorithm

Class PathsBetweenQuery

java.lang.Object

org.biopax.paxtools.query.algorithm.PathsBetweenQuery

public class PathsBetweenQuery
extends Object

Finds the paths between the specified source set of states within the boundaries of a specified length limit.

Author:

Ozgun Babur

Constructor Summary

Constructors

Constructor	Description
PathsBetweenQuery(Collection<Set<Node>> sourceSet, int limit)	Constructor with parameters

Method Summary

Modifier and Type	Method	Description
Set<GraphObject>	run()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

PathsBetweenQuery

public PathsBetweenQuery(Collection<Set<Node>> sourceSet,
 int limit)

Constructor with parameters

Parameters:

sourceSet - Seed to the query

limit - Distance limit

Method Details

run

public Set<GraphObject> run()