Package org.biopax.paxtools.query.wrapperL3

Class UbiqueFilter

java.lang.Object

org.biopax.paxtools.query.wrapperL3.Filter

org.biopax.paxtools.query.wrapperL3.UbiqueFilter

public class UbiqueFilter
extends Filter

Filters out ubiquitous entities, whose IDs are supplied by user.

Author:

Ozgun Babur

Constructor Summary

Constructors

Constructor	Description
UbiqueFilter(Set<String> ubiqueIDs)	Constructor.

Method Summary

Modifier and Type	Method	Description
boolean	okToTraverse(Level3Element ele)	Checks if the ID of the given element is in the black list.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

UbiqueFilter

public UbiqueFilter(Set<String> ubiqueIDs)

Constructor.

Parameters:

ubiqueIDs - IDS of ubiquitous entities

Method Details

okToTraverse

public boolean okToTraverse(Level3Element ele)

Checks if the ID of the given element is in the black list.

Specified by:

okToTraverse in class Filter

Parameters:

ele - level 3 element to check

Returns:

true if the element is not black-listed