Uses of Package
org.biopax.paxtools.query.model
Packages that use org.biopax.paxtools.query.model
Package
Description
Graph-theoretic querying module in Paxtools is used for identifying paths between molecules or identifying other
molecules that is reachable through some specific paths using the BioPAX data model.
This package contains the SIF rules for BioPAX Level 3.
This package contains the SIF rules for BioPAX Level 3.
This package contains TODO annotate!
This package contains TODO annotate!
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Classes in org.biopax.paxtools.query.model used by org.biopax.paxtools.query
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Classes in org.biopax.paxtools.query.model used by org.biopax.paxtools.query.algorithmClassDescriptionWrapper interface for edges in a graph to be queried.A graph object is the common interface for nodes and edges in a graph.Node interface to use in graph algorithms.
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Classes in org.biopax.paxtools.query.model used by org.biopax.paxtools.query.modelClassDescriptionWrapper interface for edges in a graph to be queried.This graph interface is used in graph algorithms.A graph object is the common interface for nodes and edges in a graph.Node interface to use in graph algorithms.
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Classes in org.biopax.paxtools.query.model used by org.biopax.paxtools.query.wrapperL3ClassDescriptionThe base class for an edge in the traversed graph.Adapter class for a graph that is queried.Wrapper interface for edges in a graph to be queried.This graph interface is used in graph algorithms.A graph object is the common interface for nodes and edges in a graph.Node interface to use in graph algorithms.
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Classes in org.biopax.paxtools.query.model used by org.biopax.paxtools.query.wrapperL3undirectedClassDescriptionThe base class for an edge in the traversed graph.Adapter class for a graph that is queried.Wrapper interface for edges in a graph to be queried.This graph interface is used in graph algorithms.A graph object is the common interface for nodes and edges in a graph.Node interface to use in graph algorithms.