Package org.biopax.paxtools.io.sbgn.idmapping

Class EntrezGene

java.lang.Object

org.biopax.paxtools.io.sbgn.idmapping.EntrezGene

public class EntrezGene
extends Object

This class provides a mapping Entrez Gene IDs and gene symbols.

Author:

Ozgun Babur

Constructor Summary

Constructors

Constructor	Description
EntrezGene()

Method Summary

Modifier and Type	Method	Description
static boolean	containsID(String id)
static boolean	containsSymbol(String symbol)
static String	getID(String symbol)	Provides Entrez Gene ID of the given gene symbol.
static String	getSymbol(String id)
static void	main(String[] args)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

EntrezGene

public EntrezGene()

Method Details

main

public static void main(String[] args)

getID

public static String getID(String symbol)

Provides Entrez Gene ID of the given gene symbol.

Parameters:

symbol - gene symbol

Returns:

EG ID

getSymbol

public static String getSymbol(String id)

containsID

public static boolean containsID(String id)

containsSymbol

public static boolean containsSymbol(String symbol)