| Package | Description |
|---|---|
| org.biopax.paxtools.io.sif.level3 |
This package contains the SIF rules for BioPAX Level 3.
|
| Class and Description |
|---|
| ChangeType
This enum handles types of modifications and contains utility methods for extracting them.
|
| Group
This class represents a grouping of EntityReferences strictly used by SIF rules for handling generics and complexes.
|
| GroupMap |
| InteractionRuleL3
This interface defines a rule which can be run on BioPAX model L2 to derive
simple interactions.
|
| InteractionRuleL3Adaptor
Base class for level 3 interactions rules.
|
| InteractionSetL3
Set of inferred interactions.
|
| PEStateChange
This experimental class is used by Activity Network Analyzer to capture state change events.
|
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