org.brapi.v2.model.geno

Class BrAPICallGenotypeMetadata

java.lang.Object

org.brapi.v2.model.geno.BrAPICallGenotypeMetadata

public class BrAPICallGenotypeMetadata
extends Object

CallGenotypeMetadata

Constructor Summary

Constructors

Constructor and Description
BrAPICallGenotypeMetadata()

Method Summary

Modifier and Type	Method and Description
BrAPICallGenotypeMetadata	dataType(BrAPIDataTypeEnum dataType)
boolean	equals(Object o)
BrAPICallGenotypeMetadata	fieldAbbreviation(String fieldAbbreviation)
BrAPICallGenotypeMetadata	fieldName(String fieldName)
BrAPICallGenotypeMetadata	fieldValue(String fieldValue)
BrAPIDataTypeEnum	getDataType() The type of field represented in this Genotype Field.
String	getFieldAbbreviation() The abbreviated code of the field represented in this Genotype Field.
String	getFieldName() The name of the field represented in this Genotype Field.
String	getFieldValue() The additional metadata value associated with this genotype call
int	hashCode()
void	setDataType(BrAPIDataTypeEnum dataType)
void	setFieldAbbreviation(String fieldAbbreviation)
void	setFieldName(String fieldName)
void	setFieldValue(String fieldValue)
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

BrAPICallGenotypeMetadata

public BrAPICallGenotypeMetadata()

Method Detail

dataType

public BrAPICallGenotypeMetadata dataType(BrAPIDataTypeEnum dataType)

getDataType

public BrAPIDataTypeEnum getDataType()

The type of field represented in this Genotype Field. This is intended to help parse the data out of JSON.

Returns:

dataType

setDataType

public void setDataType(BrAPIDataTypeEnum dataType)

fieldAbbreviation

public BrAPICallGenotypeMetadata fieldAbbreviation(String fieldAbbreviation)

getFieldAbbreviation

public String getFieldAbbreviation()

The abbreviated code of the field represented in this Genotype Field. These codes should match the VCF standard when possible. Examples include: \"GQ\", \"RD\", and \"HQ\" <br> This maps to a FORMAT field in the VCF file standard.

Returns:

fieldAbbreviation

setFieldAbbreviation

public void setFieldAbbreviation(String fieldAbbreviation)

fieldName

public BrAPICallGenotypeMetadata fieldName(String fieldName)

getFieldName

public String getFieldName()

The name of the field represented in this Genotype Field. Examples include: \"Genotype Quality\", \"Read Depth\", and \"Haplotype Quality\" <br> This maps to a FORMAT field in the VCF file standard.

Returns:

fieldName

setFieldName

public void setFieldName(String fieldName)

fieldValue

public BrAPICallGenotypeMetadata fieldValue(String fieldValue)

getFieldValue

public String getFieldValue()

The additional metadata value associated with this genotype call

Returns:

fieldValue

setFieldValue

public void setFieldValue(String fieldValue)

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object