org.brapi.v2.model.geno

Class BrAPICallSet

java.lang.Object

org.brapi.v2.model.geno.BrAPICallSet

public class BrAPICallSet
extends Object

A CallSet is a collection of calls that were generated by the same analysis of the same sample.

Constructor Summary

Constructors

Constructor and Description
BrAPICallSet()

Method Summary

Modifier and Type	Method and Description
BrAPICallSet	additionalInfo(com.google.gson.JsonObject additionalInfo)
BrAPICallSet	addVariantSetDbIdsItem(String variantSetDbIdsItem)
BrAPICallSet	callSetDbId(String callSetDbId)
BrAPICallSet	callSetName(String callSetName)
BrAPICallSet	created(OffsetDateTime created)
boolean	equals(Object o)
BrAPICallSet	externalReferences(List<BrAPIExternalReference> externalReferences)
com.google.gson.JsonObject	getAdditionalInfo() Additional arbitrary info
String	getCallSetDbId() The call set ID.
String	getCallSetName() The call set name.
@Valid OffsetDateTime	getCreated() The date this call set was created
List<BrAPIExternalReference>	getExternalReferences() Get externalReferences
String	getSampleDbId() The Biosample entity the call set data was generated from.
String	getStudyDbId() The ID which uniquely identifies a study within the given database server
@Valid OffsetDateTime	getUpdated() The time at which this call set was last updated
List<String>	getVariantSetDbIds() The IDs of the variant sets this call set has calls in.
int	hashCode()
BrAPICallSet	putAdditionalInfoItem(String key, Object additionalInfoItem)
BrAPICallSet	sampleDbId(String sampleDbId)
void	setAdditionalInfo(com.google.gson.JsonObject additionalInfo)
void	setCallSetDbId(String callSetDbId)
void	setCallSetName(String callSetName)
void	setCreated(OffsetDateTime created)
void	setExternalReferences(List<BrAPIExternalReference> externalReferences)
void	setSampleDbId(String sampleDbId)
void	setStudyDbId(String studyDbId)
void	setUpdated(OffsetDateTime updated)
void	setVariantSetDbIds(List<String> variantSetDbIds)
BrAPICallSet	studyDbId(String studyDbId)
String	toString()
BrAPICallSet	updated(OffsetDateTime updated)
BrAPICallSet	variantSetDbIds(List<String> variantSetDbIds)

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

BrAPICallSet

public BrAPICallSet()

Method Detail

additionalInfo

public BrAPICallSet additionalInfo(com.google.gson.JsonObject additionalInfo)

putAdditionalInfoItem

public BrAPICallSet putAdditionalInfoItem(String key,
                                          Object additionalInfoItem)

getAdditionalInfo

public com.google.gson.JsonObject getAdditionalInfo()

Additional arbitrary info

Returns:

additionalInfo

setAdditionalInfo

public void setAdditionalInfo(com.google.gson.JsonObject additionalInfo)

callSetDbId

public BrAPICallSet callSetDbId(String callSetDbId)

getCallSetDbId

public String getCallSetDbId()

The call set ID.

Returns:

callSetDbId

setCallSetDbId

public void setCallSetDbId(String callSetDbId)

callSetName

public BrAPICallSet callSetName(String callSetName)

getCallSetName

public String getCallSetName()

The call set name.

Returns:

callSetName

setCallSetName

public void setCallSetName(String callSetName)

created

public BrAPICallSet created(OffsetDateTime created)

getCreated

@Valid
public @Valid OffsetDateTime getCreated()

The date this call set was created

Returns:

created

setCreated

public void setCreated(OffsetDateTime created)

externalReferences

public BrAPICallSet externalReferences(List<BrAPIExternalReference> externalReferences)

getExternalReferences

public List<BrAPIExternalReference> getExternalReferences()

Get externalReferences

Returns:

externalReferences

setExternalReferences

public void setExternalReferences(List<BrAPIExternalReference> externalReferences)

sampleDbId

public BrAPICallSet sampleDbId(String sampleDbId)

getSampleDbId

public String getSampleDbId()

The Biosample entity the call set data was generated from.

Returns:

sampleDbId

setSampleDbId

public void setSampleDbId(String sampleDbId)

studyDbId

public BrAPICallSet studyDbId(String studyDbId)

getStudyDbId

public String getStudyDbId()

The ID which uniquely identifies a study within the given database server

Returns:

studyDbId

setStudyDbId

public void setStudyDbId(String studyDbId)

updated

public BrAPICallSet updated(OffsetDateTime updated)

getUpdated

@Valid
public @Valid OffsetDateTime getUpdated()

The time at which this call set was last updated

Returns:

updated

setUpdated

public void setUpdated(OffsetDateTime updated)

variantSetDbIds

public BrAPICallSet variantSetDbIds(List<String> variantSetDbIds)

addVariantSetDbIdsItem

public BrAPICallSet addVariantSetDbIdsItem(String variantSetDbIdsItem)

getVariantSetDbIds

public List<String> getVariantSetDbIds()

The IDs of the variant sets this call set has calls in.

Returns:

variantSetIds

setVariantSetDbIds

public void setVariantSetDbIds(List<String> variantSetDbIds)

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object