org.brapi.v2.model.geno

Class BrAPIGenomeMap

java.lang.Object

org.brapi.v2.model.geno.BrAPIGenomeMap

public class BrAPIGenomeMap
extends Object

GenomeMap

Constructor Summary

Constructors

Constructor and Description
BrAPIGenomeMap()

Method Summary

Modifier and Type	Method and Description
BrAPIGenomeMap	additionalInfo(com.google.gson.JsonObject additionalInfo)
BrAPIGenomeMap	comments(String comments)
BrAPIGenomeMap	commonCropName(String commonCropName)
BrAPIGenomeMap	documentationURL(String documentationURL)
boolean	equals(Object o)
com.google.gson.JsonObject	getAdditionalInfo() Additional arbitrary info
String	getComments() Additional comments
String	getCommonCropName() The common name of the crop
String	getDocumentationURL() A URL to the human readable documentation of this object
Integer	getLinkageGroupCount() The number of linkage groups present in this genomic map
String	getMapDbId() The ID which uniquely identifies this genomic map
String	getMapName() A human readable name for this genomic map
String	getMapPUI() The DOI or other permanent identifier for this genomic map
Integer	getMarkerCount() The number of markers present in this genomic map
@Valid OffsetDateTime	getPublishedDate() The date this genome was published
String	getScientificName() Full scientific binomial format name.
String	getType() The type of map this represents, usually \"Genetic\"
String	getUnit() The units used to describe the data in this map
int	hashCode()
BrAPIGenomeMap	linkageGroupCount(Integer linkageGroupCount)
BrAPIGenomeMap	mapDbId(String mapDbId)
BrAPIGenomeMap	mapName(String mapName)
BrAPIGenomeMap	mapPUI(String mapPUI)
BrAPIGenomeMap	markerCount(Integer markerCount)
BrAPIGenomeMap	publishedDate(OffsetDateTime publishedDate)
BrAPIGenomeMap	putAdditionalInfoItem(String key, Object additionalInfoItem)
BrAPIGenomeMap	scientificName(String scientificName)
void	setAdditionalInfo(com.google.gson.JsonObject additionalInfo)
void	setComments(String comments)
void	setCommonCropName(String commonCropName)
void	setDocumentationURL(String documentationURL)
void	setLinkageGroupCount(Integer linkageGroupCount)
void	setMapDbId(String mapDbId)
void	setMapName(String mapName)
void	setMapPUI(String mapPUI)
void	setMarkerCount(Integer markerCount)
void	setPublishedDate(OffsetDateTime publishedDate)
void	setScientificName(String scientificName)
void	setType(String type)
void	setUnit(String unit)
String	toString()
BrAPIGenomeMap	type(String type)
BrAPIGenomeMap	unit(String unit)

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

BrAPIGenomeMap

public BrAPIGenomeMap()

Method Detail

additionalInfo

public BrAPIGenomeMap additionalInfo(com.google.gson.JsonObject additionalInfo)

putAdditionalInfoItem

public BrAPIGenomeMap putAdditionalInfoItem(String key,
                                            Object additionalInfoItem)

getAdditionalInfo

public com.google.gson.JsonObject getAdditionalInfo()

Additional arbitrary info

Returns:

additionalInfo

setAdditionalInfo

public void setAdditionalInfo(com.google.gson.JsonObject additionalInfo)

comments

public BrAPIGenomeMap comments(String comments)

getComments

public String getComments()

Additional comments

Returns:

comments

setComments

public void setComments(String comments)

commonCropName

public BrAPIGenomeMap commonCropName(String commonCropName)

getCommonCropName

public String getCommonCropName()

The common name of the crop

Returns:

commonCropName

setCommonCropName

public void setCommonCropName(String commonCropName)

documentationURL

public BrAPIGenomeMap documentationURL(String documentationURL)

getDocumentationURL

public String getDocumentationURL()

A URL to the human readable documentation of this object

Returns:

documentationURL

setDocumentationURL

public void setDocumentationURL(String documentationURL)

linkageGroupCount

public BrAPIGenomeMap linkageGroupCount(Integer linkageGroupCount)

getLinkageGroupCount

public Integer getLinkageGroupCount()

The number of linkage groups present in this genomic map

Returns:

linkageGroupCount

setLinkageGroupCount

public void setLinkageGroupCount(Integer linkageGroupCount)

mapDbId

public BrAPIGenomeMap mapDbId(String mapDbId)

getMapDbId

public String getMapDbId()

The ID which uniquely identifies this genomic map

Returns:

mapDbId

setMapDbId

public void setMapDbId(String mapDbId)

mapName

public BrAPIGenomeMap mapName(String mapName)

getMapName

public String getMapName()

A human readable name for this genomic map

Returns:

mapName

setMapName

public void setMapName(String mapName)

mapPUI

public BrAPIGenomeMap mapPUI(String mapPUI)

getMapPUI

public String getMapPUI()

The DOI or other permanent identifier for this genomic map

Returns:

mapPUI

setMapPUI

public void setMapPUI(String mapPUI)

markerCount

public BrAPIGenomeMap markerCount(Integer markerCount)

getMarkerCount

public Integer getMarkerCount()

The number of markers present in this genomic map

Returns:

markerCount

setMarkerCount

public void setMarkerCount(Integer markerCount)

publishedDate

public BrAPIGenomeMap publishedDate(OffsetDateTime publishedDate)

getPublishedDate

@Valid
public @Valid OffsetDateTime getPublishedDate()

The date this genome was published

Returns:

publishedDate

setPublishedDate

public void setPublishedDate(OffsetDateTime publishedDate)

scientificName

public BrAPIGenomeMap scientificName(String scientificName)

getScientificName

public String getScientificName()

Full scientific binomial format name. This includes Genus, Species, and Sub-species

Returns:

scientificName

setScientificName

public void setScientificName(String scientificName)

type

public BrAPIGenomeMap type(String type)

getType

public String getType()

The type of map this represents, usually \"Genetic\"

Returns:

type

setType

public void setType(String type)

unit

public BrAPIGenomeMap unit(String unit)

getUnit

public String getUnit()

The units used to describe the data in this map

Returns:

unit

setUnit

public void setUnit(String unit)

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object