public class BrAPIGermplasm extends Object
| Constructor and Description |
|---|
BrAPIGermplasm() |
| Modifier and Type | Method and Description |
|---|---|
BrAPIGermplasm |
accessionNumber(String accessionNumber) |
BrAPIGermplasm |
acquisitionDate(LocalDate acquisitionDate) |
BrAPIGermplasm |
addDonorsItem(BrAPIGermplasmDonors donorsItem) |
BrAPIGermplasm |
addGermplasmOriginItem(BrAPIGermplasmOrigin germplasmOriginItem) |
BrAPIGermplasm |
additionalInfo(com.google.gson.JsonObject additionalInfo) |
BrAPIGermplasm |
addStorageTypesItem(BrAPIGermplasmStorageTypes storageTypesItem) |
BrAPIGermplasm |
addSynonymsItem(BrAPIGermplasmSynonyms synonymsItem) |
BrAPIGermplasm |
addTaxonIdsItem(BrAPITaxonID taxonIdsItem) |
BrAPIGermplasm |
biologicalStatusOfAccessionCode(BrAPIBiologicalStatusOfAccessionCode biologicalStatusOfAccessionCode) |
BrAPIGermplasm |
biologicalStatusOfAccessionDescription(String biologicalStatusOfAccessionDescription) |
BrAPIGermplasm |
breedingMethodDbId(String breedingMethodDbId) |
BrAPIGermplasm |
breedingMethodName(String breedingMethodName) |
BrAPIGermplasm |
collection(String collection) |
BrAPIGermplasm |
commonCropName(String commonCropName) |
BrAPIGermplasm |
countryOfOriginCode(String countryOfOriginCode) |
BrAPIGermplasm |
defaultDisplayName(String defaultDisplayName) |
BrAPIGermplasm |
documentationURL(String documentationURL) |
BrAPIGermplasm |
donors(List<BrAPIGermplasmDonors> donors) |
boolean |
equals(Object o) |
BrAPIGermplasm |
externalReferences(List<BrAPIExternalReference> externalReferences) |
BrAPIGermplasm |
genus(String genus) |
BrAPIGermplasm |
germplasmDbId(String germplasmDbId) |
BrAPIGermplasm |
germplasmName(String germplasmName) |
BrAPIGermplasm |
germplasmOrigin(List<BrAPIGermplasmOrigin> germplasmOrigin) |
BrAPIGermplasm |
germplasmPreprocessing(String germplasmPreprocessing) |
BrAPIGermplasm |
germplasmPUI(String germplasmPUI) |
String |
getAccessionNumber()
This is the unique identifier for accessions within a genebank, and is
assigned when a sample is entered into the genebank collection
|
LocalDate |
getAcquisitionDate()
The date this germplasm was acquired by the genebank MCPD (v2.1) (ACQDATE)
12.
|
com.google.gson.JsonObject |
getAdditionalInfo()
Additional arbitrary info
|
BrAPIBiologicalStatusOfAccessionCode |
getBiologicalStatusOfAccessionCode()
MCPD (v2.1) (SAMPSTAT) 19.
|
String |
getBiologicalStatusOfAccessionDescription()
Supplemental text description for 'biologicalStatusOfAccessionCode'
|
String |
getBreedingMethodDbId()
The unique identifier for the breeding method used to create this germplasm
|
String |
getBreedingMethodName()
The unique identifier for the breeding method used to create this germplasm
|
String |
getCollection()
A specific panel/collection/population name this germplasm belongs to.
|
String |
getCommonCropName() |
String |
getCountryOfOriginCode()
3-letter ISO 3166-1 code of the country in which the sample was originally
collected MCPD (v2.1) (ORIGCTY) 13.
|
String |
getDefaultDisplayName()
Human readable name used for display purposes
|
String |
getDocumentationURL()
A URL to the human readable documentation of this object
|
List<BrAPIGermplasmDonors> |
getDonors()
List of donor institutes
|
List<BrAPIExternalReference> |
getExternalReferences()
Get externalReferences
|
String |
getGenus()
Genus name for taxon.
|
String |
getGermplasmDbId()
The ID which uniquely identifies a germplasm within the given database server
MIAPPE V1.1 (DM-41) Biological material ID - Code used to identify the
biological material in the data file.
|
String |
getGermplasmName() |
List<BrAPIGermplasmOrigin> |
getGermplasmOrigin()
Information for material (orchard, natural sites, ...).
|
String |
getGermplasmPreprocessing()
Description of any process or treatment applied uniformly to the germplasm,
prior to the study itself.
|
String |
getGermplasmPUI() |
String |
getInstituteCode()
The code for the Institute that has bred the material.
|
String |
getInstituteName()
The name of the institution which bred the material
|
String |
getPedigree()
The cross name and optional selection history.
|
String |
getSeedSource()
The source of the seed
|
String |
getSeedSourceDescription()
Description of the material source
|
String |
getSpecies()
Specific epithet portion of the scientific name in lowercase letters.
|
String |
getSpeciesAuthority()
The authority organization responsible for tracking and maintaining the
species name MCPD (v2.1) (SPAUTHOR) 7.
|
List<BrAPIGermplasmStorageTypes> |
getStorageTypes()
The type of storage this germplasm is kept in at a genebank.
|
String |
getSubtaxa()
Subtaxon can be used to store any additional taxonomic identifier.
|
String |
getSubtaxaAuthority()
The authority organization responsible for tracking and maintaining the
subtaxon information MCPD (v2.1) (SUBTAUTHOR) 9.
|
List<BrAPIGermplasmSynonyms> |
getSynonyms()
List of alternative names or IDs used to reference this germplasm
|
List<BrAPITaxonID> |
getTaxonIds()
The list of IDs for this SPECIES from different sources.
|
int |
hashCode() |
BrAPIGermplasm |
instituteCode(String instituteCode) |
BrAPIGermplasm |
instituteName(String instituteName) |
BrAPIGermplasm |
pedigree(String pedigree) |
BrAPIGermplasm |
putAdditionalInfoItem(String key,
Object additionalInfoItem) |
BrAPIGermplasm |
seedSource(String seedSource) |
BrAPIGermplasm |
seedSourceDescription(String seedSourceDescription) |
void |
setAccessionNumber(String accessionNumber) |
void |
setAcquisitionDate(LocalDate acquisitionDate) |
void |
setAdditionalInfo(com.google.gson.JsonObject additionalInfo) |
void |
setBiologicalStatusOfAccessionCode(BrAPIBiologicalStatusOfAccessionCode biologicalStatusOfAccessionCode) |
void |
setBiologicalStatusOfAccessionDescription(String biologicalStatusOfAccessionDescription) |
void |
setBreedingMethodDbId(String breedingMethodDbId) |
void |
setBreedingMethodName(String breedingMethodName) |
void |
setCollection(String collection) |
void |
setCommonCropName(String commonCropName) |
void |
setCountryOfOriginCode(String countryOfOriginCode) |
void |
setDefaultDisplayName(String defaultDisplayName) |
void |
setDocumentationURL(String documentationURL) |
void |
setDonors(List<BrAPIGermplasmDonors> donors) |
void |
setExternalReferences(List<BrAPIExternalReference> externalReferences) |
void |
setGenus(String genus) |
void |
setGermplasmDbId(String germplasmDbId) |
void |
setGermplasmName(String germplasmName) |
void |
setGermplasmOrigin(List<BrAPIGermplasmOrigin> germplasmOrigin) |
void |
setGermplasmPreprocessing(String germplasmPreprocessing) |
void |
setGermplasmPUI(String germplasmPUI) |
void |
setInstituteCode(String instituteCode) |
void |
setInstituteName(String instituteName) |
void |
setPedigree(String pedigree) |
void |
setSeedSource(String seedSource) |
void |
setSeedSourceDescription(String seedSourceDescription) |
void |
setSpecies(String species) |
void |
setSpeciesAuthority(String speciesAuthority) |
void |
setStorageTypes(List<BrAPIGermplasmStorageTypes> storageTypes) |
void |
setSubtaxa(String subtaxa) |
void |
setSubtaxaAuthority(String subtaxaAuthority) |
void |
setSynonyms(List<BrAPIGermplasmSynonyms> synonyms) |
void |
setTaxonIds(List<BrAPITaxonID> taxonIds) |
BrAPIGermplasm |
species(String species) |
BrAPIGermplasm |
speciesAuthority(String speciesAuthority) |
BrAPIGermplasm |
storageTypes(List<BrAPIGermplasmStorageTypes> storageTypes) |
BrAPIGermplasm |
subtaxa(String subtaxa) |
BrAPIGermplasm |
subtaxaAuthority(String subtaxaAuthority) |
BrAPIGermplasm |
synonyms(List<BrAPIGermplasmSynonyms> synonyms) |
BrAPIGermplasm |
taxonIds(List<BrAPITaxonID> taxonIds) |
String |
toString() |
public BrAPIGermplasm germplasmDbId(String germplasmDbId)
public String getGermplasmDbId()
public void setGermplasmDbId(String germplasmDbId)
public BrAPIGermplasm accessionNumber(String accessionNumber)
public String getAccessionNumber()
public void setAccessionNumber(String accessionNumber)
public BrAPIGermplasm acquisitionDate(LocalDate acquisitionDate)
public LocalDate getAcquisitionDate()
public void setAcquisitionDate(LocalDate acquisitionDate)
public BrAPIGermplasm additionalInfo(com.google.gson.JsonObject additionalInfo)
public BrAPIGermplasm putAdditionalInfoItem(String key, Object additionalInfoItem)
public com.google.gson.JsonObject getAdditionalInfo()
public void setAdditionalInfo(com.google.gson.JsonObject additionalInfo)
public BrAPIGermplasm biologicalStatusOfAccessionCode(BrAPIBiologicalStatusOfAccessionCode biologicalStatusOfAccessionCode)
public BrAPIBiologicalStatusOfAccessionCode getBiologicalStatusOfAccessionCode()
public void setBiologicalStatusOfAccessionCode(BrAPIBiologicalStatusOfAccessionCode biologicalStatusOfAccessionCode)
public BrAPIGermplasm biologicalStatusOfAccessionDescription(String biologicalStatusOfAccessionDescription)
public String getBiologicalStatusOfAccessionDescription()
public void setBiologicalStatusOfAccessionDescription(String biologicalStatusOfAccessionDescription)
public BrAPIGermplasm breedingMethodDbId(String breedingMethodDbId)
public String getBreedingMethodDbId()
public void setBreedingMethodDbId(String breedingMethodDbId)
public BrAPIGermplasm breedingMethodName(String breedingMethodName)
public String getBreedingMethodName()
public void setBreedingMethodName(String breedingMethodName)
public BrAPIGermplasm collection(String collection)
public String getCollection()
public void setCollection(String collection)
public BrAPIGermplasm commonCropName(String commonCropName)
public String getCommonCropName()
public void setCommonCropName(String commonCropName)
public BrAPIGermplasm countryOfOriginCode(String countryOfOriginCode)
public String getCountryOfOriginCode()
public void setCountryOfOriginCode(String countryOfOriginCode)
public BrAPIGermplasm defaultDisplayName(String defaultDisplayName)
public String getDefaultDisplayName()
public void setDefaultDisplayName(String defaultDisplayName)
public BrAPIGermplasm documentationURL(String documentationURL)
public String getDocumentationURL()
public void setDocumentationURL(String documentationURL)
public BrAPIGermplasm donors(List<BrAPIGermplasmDonors> donors)
public BrAPIGermplasm addDonorsItem(BrAPIGermplasmDonors donorsItem)
public List<BrAPIGermplasmDonors> getDonors()
public void setDonors(List<BrAPIGermplasmDonors> donors)
public BrAPIGermplasm externalReferences(List<BrAPIExternalReference> externalReferences)
public List<BrAPIExternalReference> getExternalReferences()
public void setExternalReferences(List<BrAPIExternalReference> externalReferences)
public BrAPIGermplasm genus(String genus)
public String getGenus()
public void setGenus(String genus)
public BrAPIGermplasm germplasmName(String germplasmName)
public String getGermplasmName()
public void setGermplasmName(String germplasmName)
public BrAPIGermplasm germplasmOrigin(List<BrAPIGermplasmOrigin> germplasmOrigin)
public BrAPIGermplasm addGermplasmOriginItem(BrAPIGermplasmOrigin germplasmOriginItem)
public List<BrAPIGermplasmOrigin> getGermplasmOrigin()
public void setGermplasmOrigin(List<BrAPIGermplasmOrigin> germplasmOrigin)
public BrAPIGermplasm germplasmPUI(String germplasmPUI)
public String getGermplasmPUI()
public void setGermplasmPUI(String germplasmPUI)
public BrAPIGermplasm germplasmPreprocessing(String germplasmPreprocessing)
public String getGermplasmPreprocessing()
public void setGermplasmPreprocessing(String germplasmPreprocessing)
public BrAPIGermplasm instituteCode(String instituteCode)
public String getInstituteCode()
public void setInstituteCode(String instituteCode)
public BrAPIGermplasm instituteName(String instituteName)
public String getInstituteName()
public void setInstituteName(String instituteName)
public BrAPIGermplasm pedigree(String pedigree)
public String getPedigree()
public void setPedigree(String pedigree)
public BrAPIGermplasm seedSource(String seedSource)
public String getSeedSource()
public void setSeedSource(String seedSource)
public BrAPIGermplasm seedSourceDescription(String seedSourceDescription)
public String getSeedSourceDescription()
public void setSeedSourceDescription(String seedSourceDescription)
public BrAPIGermplasm species(String species)
public String getSpecies()
public void setSpecies(String species)
public BrAPIGermplasm speciesAuthority(String speciesAuthority)
public String getSpeciesAuthority()
public void setSpeciesAuthority(String speciesAuthority)
public BrAPIGermplasm storageTypes(List<BrAPIGermplasmStorageTypes> storageTypes)
public BrAPIGermplasm addStorageTypesItem(BrAPIGermplasmStorageTypes storageTypesItem)
public List<BrAPIGermplasmStorageTypes> getStorageTypes()
public void setStorageTypes(List<BrAPIGermplasmStorageTypes> storageTypes)
public BrAPIGermplasm subtaxa(String subtaxa)
public String getSubtaxa()
public void setSubtaxa(String subtaxa)
public BrAPIGermplasm subtaxaAuthority(String subtaxaAuthority)
public String getSubtaxaAuthority()
public void setSubtaxaAuthority(String subtaxaAuthority)
public BrAPIGermplasm synonyms(List<BrAPIGermplasmSynonyms> synonyms)
public BrAPIGermplasm addSynonymsItem(BrAPIGermplasmSynonyms synonymsItem)
public List<BrAPIGermplasmSynonyms> getSynonyms()
public void setSynonyms(List<BrAPIGermplasmSynonyms> synonyms)
public BrAPIGermplasm taxonIds(List<BrAPITaxonID> taxonIds)
public BrAPIGermplasm addTaxonIdsItem(BrAPITaxonID taxonIdsItem)
public List<BrAPITaxonID> getTaxonIds()
public void setTaxonIds(List<BrAPITaxonID> taxonIds)
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