BrAPIPedigreeNode (brapi-java-model 2.1.0 API)

java.lang.Object
- org.brapi.v2.model.germ.BrAPIPedigreeNode

public class BrAPIPedigreeNode
extends Object

PedigreeNode

Constructor Summary

Constructors
Constructor and Description

BrAPIPedigreeNode()

Constructors
Constructor and Description
`BrAPIPedigreeNode()`

Method Summary

All Methods Instance Methods Concrete Methods Deprecated Methods
Modifier and Type	Method and Description
`BrAPIPedigreeNode`	`additionalInfo(Map<String,String> additionalInfo)`
`BrAPIPedigreeNode`	`addParentsItem(BrAPIPedigreeNodeRelative parentsItem)`
`BrAPIPedigreeNode`	`addProgenyItem(BrAPIPedigreeNodeRelative progenyItem)`
`BrAPIPedigreeNode`	`addSiblingsItem(BrAPIPedigreeNodeSibling siblingsItem)`
`BrAPIPedigreeNode`	`breedingMethodDbId(String breedingMethodDbId)`
`BrAPIPedigreeNode`	`breedingMethodName(String breedingMethodName)`
`BrAPIPedigreeNode`	`crossingProjectDbId(String crossingProjectDbId)`
`BrAPIPedigreeNode`	`crossingYear(Integer crossingYear)`
`BrAPIPedigreeNode`	`defaultDisplayName(String defaultDisplayName)`
`boolean`	`equals(Object o)`
`BrAPIPedigreeNode`	`externalReferences(List<BrAPIExternalReference> externalReferences)`
`BrAPIPedigreeNode`	`familyCode(String familyCode)`
`BrAPIPedigreeNode`	`germplasmDbId(String germplasmDbId)`
`BrAPIPedigreeNode`	`germplasmName(String germplasmName)`
`BrAPIPedigreeNode`	`germplasmPUI(String germplasmPUI)`
`Map<String,String>`	`getAdditionalInfo()` A free space containing any additional information related to a particular object.
`String`	`getBreedingMethodDbId()` The unique identifier for the breeding method used to create this germplasm
`String`	`getBreedingMethodName()` The human readable name of the breeding method used to create this germplasm
`String`	`getCrossingProjectDbId()` The crossing project used to generate this germplasm
`Integer`	`getCrossingYear()` The year the parents were originally crossed
`String`	`getDefaultDisplayName()` Human readable name used for display purposes
`List<BrAPIExternalReference>`	`getExternalReferences()` Get externalReferences
`String`	`getFamilyCode()` The code representing the family of this germplasm
`String`	`getGermplasmDbId()` The ID which uniquely identifies a germplasm
`String`	`getGermplasmName()` A human readable name for a germplasm
`String`	`getGermplasmPUI()` The Permanent Unique Identifier which represents a germplasm MIAPPE V1.1 (DM-41) Biological material ID - Code used to identify the biological material in the data file.
`List<? extends BrAPIPedigreeNodeRelative>`	`getParents()` A list of parent germplasm references in the pedigree tree for this germplasm.
`String`	`getPedigree()` Deprecated.
`String`	`getPedigreeString()` The string representation of the pedigree for this germplasm in PURDY notation
`List<BrAPIPedigreeNodeRelative>`	`getProgeny()` A list of germplasm references that are direct children of this germplasm.
`List<? extends BrAPIPedigreeNodeSibling>`	`getSiblings()` A list of sibling germplasm references in the pedigree tree for this germplasm.
`int`	`hashCode()`
`BrAPIPedigreeNode`	`parents(List<? extends BrAPIPedigreeNodeRelative> parents)`
`BrAPIPedigreeNode`	`pedigree(String pedigree)` Deprecated.
`BrAPIPedigreeNode`	`pedigreeString(String pedigreeString)`
`BrAPIPedigreeNode`	`progeny(List<BrAPIPedigreeNodeRelative> progeny)`
`BrAPIPedigreeNode`	`putAdditionalInfoItem(String key, String additionalInfoItem)`
`void`	`setAdditionalInfo(Map<String,String> additionalInfo)`
`void`	`setBreedingMethodDbId(String breedingMethodDbId)`
`void`	`setBreedingMethodName(String breedingMethodName)`
`void`	`setCrossingProjectDbId(String crossingProjectDbId)`
`void`	`setCrossingYear(Integer crossingYear)`
`void`	`setDefaultDisplayName(String defaultDisplayName)`
`void`	`setExternalReferences(List<BrAPIExternalReference> externalReferences)`
`void`	`setFamilyCode(String familyCode)`
`void`	`setGermplasmDbId(String germplasmDbId)`
`void`	`setGermplasmName(String germplasmName)`
`void`	`setGermplasmPUI(String germplasmPUI)`
`void`	`setParents(List<? extends BrAPIPedigreeNodeRelative> parents)`
`void`	`setPedigree(String pedigree)` Deprecated.
`void`	`setPedigreeString(String pedigreeString)`
`void`	`setProgeny(List<BrAPIPedigreeNodeRelative> progeny)`
`void`	`setSiblings(List<? extends BrAPIPedigreeNodeSibling> siblings)`
`BrAPIPedigreeNode`	`siblings(List<? extends BrAPIPedigreeNodeSibling> siblings)`
`String`	`toString()`

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait

- Constructor Detail
 - BrAPIPedigreeNode
```
public BrAPIPedigreeNode()
```
- Method Detail
 - additionalInfo
```
public BrAPIPedigreeNode additionalInfo(Map<String,String> additionalInfo)
```
 - putAdditionalInfoItem
```
public BrAPIPedigreeNode putAdditionalInfoItem(String key,
 String additionalInfoItem)
```
 - getAdditionalInfo
```
public Map<String,String> getAdditionalInfo()
```
 A free space containing any additional information related to a particular object. A data source may provide any JSON object, unrestriced by the BrAPI specification.
 
 Returns:
 
 additionalInfo
 - setAdditionalInfo
```
public void setAdditionalInfo(Map<String,String> additionalInfo)
```
 - breedingMethodDbId
```
public BrAPIPedigreeNode breedingMethodDbId(String breedingMethodDbId)
```
 - getBreedingMethodDbId
```
public String getBreedingMethodDbId()
```
 The unique identifier for the breeding method used to create this germplasm
 
 Returns:
 
 breedingMethodDbId
 - setBreedingMethodDbId
```
public void setBreedingMethodDbId(String breedingMethodDbId)
```
 - breedingMethodName
```
public BrAPIPedigreeNode breedingMethodName(String breedingMethodName)
```
 - getBreedingMethodName
```
public String getBreedingMethodName()
```
 The human readable name of the breeding method used to create this germplasm
 
 Returns:
 
 breedingMethodName
 - setBreedingMethodName
```
public void setBreedingMethodName(String breedingMethodName)
```
 - crossingProjectDbId
```
public BrAPIPedigreeNode crossingProjectDbId(String crossingProjectDbId)
```
 - getCrossingProjectDbId
```
public String getCrossingProjectDbId()
```
 The crossing project used to generate this germplasm
 
 Returns:
 
 crossingProjectDbId
 - setCrossingProjectDbId
```
public void setCrossingProjectDbId(String crossingProjectDbId)
```
 - crossingYear
```
public BrAPIPedigreeNode crossingYear(Integer crossingYear)
```
 - getCrossingYear
```
public Integer getCrossingYear()
```
 The year the parents were originally crossed
 
 Returns:
 
 crossingYear
 - setCrossingYear
```
public void setCrossingYear(Integer crossingYear)
```
 - defaultDisplayName
```
public BrAPIPedigreeNode defaultDisplayName(String defaultDisplayName)
```
 - getDefaultDisplayName
```
public String getDefaultDisplayName()
```
 Human readable name used for display purposes
 
 Returns:
 
 defaultDisplayName
 - setDefaultDisplayName
```
public void setDefaultDisplayName(String defaultDisplayName)
```
 - externalReferences
```
public BrAPIPedigreeNode externalReferences(List<BrAPIExternalReference> externalReferences)
```
 - getExternalReferences
```
public List<BrAPIExternalReference> getExternalReferences()
```
 Get externalReferences
 
 Returns:
 
 externalReferences
 - setExternalReferences
```
public void setExternalReferences(List<BrAPIExternalReference> externalReferences)
```
 - familyCode
```
public BrAPIPedigreeNode familyCode(String familyCode)
```
 - getFamilyCode
```
public String getFamilyCode()
```
 The code representing the family of this germplasm
 
 Returns:
 
 familyCode
 - setFamilyCode
```
public void setFamilyCode(String familyCode)
```
 - germplasmDbId
```
public BrAPIPedigreeNode germplasmDbId(String germplasmDbId)
```
 - getGermplasmDbId
```
public String getGermplasmDbId()
```
 The ID which uniquely identifies a germplasm
 
 Returns:
 
 germplasmDbId
 - setGermplasmDbId
```
public void setGermplasmDbId(String germplasmDbId)
```
 - germplasmName
```
public BrAPIPedigreeNode germplasmName(String germplasmName)
```
 - getGermplasmName
```
public String getGermplasmName()
```
 A human readable name for a germplasm
 
 Returns:
 
 germplasmName
 - setGermplasmName
```
public void setGermplasmName(String germplasmName)
```
 - germplasmPUI
```
public BrAPIPedigreeNode germplasmPUI(String germplasmPUI)
```
 - getGermplasmPUI
```
public String getGermplasmPUI()
```
 The Permanent Unique Identifier which represents a germplasm MIAPPE V1.1 (DM-41) Biological material ID - Code used to identify the biological material in the data file. Should be unique within the Investigation. Can correspond to experimental plant ID, seed lot ID, etc This material identification is different from a BiosampleID which corresponds to Observation Unit or Samples sections below. MIAPPE V1.1 (DM-51) Material source DOI - Digital Object Identifier (DOI) of the material source MCPD (v2.1) (PUID) 0. Any persistent, unique identifier assigned to the accession so it can be unambiguously referenced at the global level and the information associated with it harvested through automated means. Report one PUID for each accession. The Secretariat of the International Treaty on Plant Genetic Resources for Food and Agriculture (PGRFA) is facilitating the assignment of a persistent unique identifier (PUID), in the form of a DOI, to PGRFA at the accession level. Genebanks not applying a true PUID to their accessions should use, and request recipients to use, the concatenation of INSTCODE, ACCENUMB, and GENUS as a globally unique identifier similar in most respects to the PUID whenever they exchange information on accessions with third parties.
 
 Returns:
 
 germplasmPUI
 - setGermplasmPUI
```
public void setGermplasmPUI(String germplasmPUI)
```
 - parents
```
public BrAPIPedigreeNode parents(List<? extends BrAPIPedigreeNodeRelative> parents)
```
 - addParentsItem
```
public BrAPIPedigreeNode addParentsItem(BrAPIPedigreeNodeRelative parentsItem)
```
 - getParents
```
public List<? extends BrAPIPedigreeNodeRelative> getParents()
```
 A list of parent germplasm references in the pedigree tree for this germplasm. These represent edges in the tree, connecting to other nodes. Typically, this array should only have one parent (clonal or self) or two parents (cross). In some special cases, there may be more parents, usually when the exact parent is not known. If the parameter 'includeParents' is set to false, then this array should be empty, null, or not present in the response.
 
 Returns:
 
 parents
 - setParents
```
public void setParents(List<? extends BrAPIPedigreeNodeRelative> parents)
```
 - pedigreeString
```
public BrAPIPedigreeNode pedigreeString(String pedigreeString)
```
 - getPedigreeString
```
public String getPedigreeString()
```
 The string representation of the pedigree for this germplasm in PURDY notation
 
 Returns:
 
 pedigreeString
 - setPedigreeString
```
public void setPedigreeString(String pedigreeString)
```
 - pedigree
```
@Deprecated
public BrAPIPedigreeNode pedigree(String pedigree)
```
 Deprecated.
 - getPedigree
```
@Deprecated
public String getPedigree()
```
 Deprecated.
 
 The string representation of the pedigree.
 
 Returns:
 
 pedigree
 - setPedigree
```
@Deprecated
public void setPedigree(String pedigree)
```
 Deprecated.
 - progeny
```
public BrAPIPedigreeNode progeny(List<BrAPIPedigreeNodeRelative> progeny)
```
 - addProgenyItem
```
public BrAPIPedigreeNode addProgenyItem(BrAPIPedigreeNodeRelative progenyItem)
```
 - getProgeny
```
public List<BrAPIPedigreeNodeRelative> getProgeny()
```
 A list of germplasm references that are direct children of this germplasm. These represent edges in the tree, connecting to other nodes. The given germplasm could have a large number of progeny, across a number of different breeding methods. The 'parentType' shows the type of parent this germplasm is to each of the child germplasm references. If the parameter 'includeProgeny' is set to false, then this array should be empty, null, or not present in the response.
 
 Returns:
 
 progeny
 - setProgeny
```
public void setProgeny(List<BrAPIPedigreeNodeRelative> progeny)
```
 - siblings
```
public BrAPIPedigreeNode siblings(List<? extends BrAPIPedigreeNodeSibling> siblings)
```
 - addSiblingsItem
```
public BrAPIPedigreeNode addSiblingsItem(BrAPIPedigreeNodeSibling siblingsItem)
```
 - getSiblings
```
public List<? extends BrAPIPedigreeNodeSibling> getSiblings()
```
 A list of sibling germplasm references in the pedigree tree for this germplasm. These represent edges in the tree, connecting to other nodes. Siblings share at least one parent with the given germplasm. If the parameter 'includeSiblings' is set to false, then this array should be empty, null, or not present in the response.
 
 Returns:
 
 siblings
 - setSiblings
```
public void setSiblings(List<? extends BrAPIPedigreeNodeSibling> siblings)
```
 - equals
```
public boolean equals(Object o)
```
 Overrides:
 
 equals in class Object
 - hashCode
```
public int hashCode()
```
 Overrides:
 
 hashCode in class Object
 - toString
```
public String toString()
```
 Overrides:
 
 toString in class Object

Class BrAPIPedigreeNode

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

BrAPIPedigreeNode

Method Detail

additionalInfo

putAdditionalInfoItem

getAdditionalInfo

setAdditionalInfo

breedingMethodDbId

getBreedingMethodDbId

setBreedingMethodDbId

breedingMethodName

getBreedingMethodName

setBreedingMethodName

crossingProjectDbId

getCrossingProjectDbId

setCrossingProjectDbId

crossingYear

getCrossingYear

setCrossingYear

defaultDisplayName

getDefaultDisplayName

setDefaultDisplayName

externalReferences

getExternalReferences

setExternalReferences

familyCode

getFamilyCode

setFamilyCode

germplasmDbId

getGermplasmDbId

setGermplasmDbId

germplasmName

getGermplasmName

setGermplasmName

germplasmPUI

getGermplasmPUI

setGermplasmPUI

parents

addParentsItem

getParents

setParents

pedigreeString

getPedigreeString

setPedigreeString

pedigree

getPedigree

setPedigree

progeny

addProgenyItem

getProgeny

setProgeny

siblings

addSiblingsItem

getSiblings

setSiblings

equals

hashCode

toString