org.brapi.v2.model.pheno

Class BrAPIMethod

java.lang.Object

org.brapi.v2.model.pheno.BrAPIMethod

public class BrAPIMethod
extends Object

Method

Constructor Summary

Constructors

Constructor and Description
BrAPIMethod()

Method Summary

Modifier and Type	Method and Description
BrAPIMethod	additionalInfo(com.google.gson.JsonObject additionalInfo)
BrAPIMethod	bibliographicalReference(String bibliographicalReference)
BrAPIMethod	description(String description)
boolean	equals(Object o)
BrAPIMethod	externalReferences(List<BrAPIExternalReference> externalReferences)
BrAPIMethod	formula(String formula)
com.google.gson.JsonObject	getAdditionalInfo() Additional arbitrary info
String	getBibliographicalReference() Bibliographical reference describing the method.
String	getDescription() Method description MIAPPE V1.1 (DM-90) Method description - Textual description of the method, which may extend a method defined in an external reference with specific parameters, e.g.
List<BrAPIExternalReference>	getExternalReferences() Get externalReferences
String	getFormula() For computational methods i.e., when the method consists in assessing the trait by computing measurements, write the generic formula used for the calculation
String	getMethodClass() Method class (examples: \"Measurement\", \"Counting\", \"Estimation\", \"Computation\", etc.)
String	getMethodDbId() Method unique identifier
String	getMethodName() Human readable name for the method MIAPPE V1.1 (DM-88) Method Name of the method of observation
String	getMethodPUI() The Permanent Unique Identifier of a Method, usually in the form of a URI
BrAPIOntologyReference	getOntologyReference() Get ontologyReference
int	hashCode()
BrAPIMethod	methodClass(String methodClass)
BrAPIMethod	methodDbId(String methodDbId)
BrAPIMethod	methodName(String methodName)
BrAPIMethod	methodPUI(String methodPUI)
BrAPIMethod	ontologyReference(BrAPIOntologyReference ontologyReference)
BrAPIMethod	putAdditionalInfoItem(String key, Object additionalInfoItem)
void	setAdditionalInfo(com.google.gson.JsonObject additionalInfo)
void	setBibliographicalReference(String bibliographicalReference)
void	setDescription(String description)
void	setExternalReferences(List<BrAPIExternalReference> externalReferences)
void	setFormula(String formula)
void	setMethodClass(String methodClass)
void	setMethodDbId(String methodDbId)
void	setMethodName(String methodName)
void	setMethodPUI(String methodPUI)
void	setOntologyReference(BrAPIOntologyReference ontologyReference)
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

BrAPIMethod

public BrAPIMethod()

Method Detail

methodDbId

public BrAPIMethod methodDbId(String methodDbId)

getMethodDbId

public String getMethodDbId()

Method unique identifier

Returns:

methodDbId

setMethodDbId

public void setMethodDbId(String methodDbId)

additionalInfo

public BrAPIMethod additionalInfo(com.google.gson.JsonObject additionalInfo)

putAdditionalInfoItem

public BrAPIMethod putAdditionalInfoItem(String key,
                                         Object additionalInfoItem)

getAdditionalInfo

public com.google.gson.JsonObject getAdditionalInfo()

Additional arbitrary info

Returns:

additionalInfo

setAdditionalInfo

public void setAdditionalInfo(com.google.gson.JsonObject additionalInfo)

bibliographicalReference

public BrAPIMethod bibliographicalReference(String bibliographicalReference)

getBibliographicalReference

public String getBibliographicalReference()

Bibliographical reference describing the method. MIAPPE V1.1 (DM-91) Reference associated to the method - URI/DOI of reference describing the method.

Returns:

bibliographicalReference

setBibliographicalReference

public void setBibliographicalReference(String bibliographicalReference)

description

public BrAPIMethod description(String description)

getDescription

public String getDescription()

Method description MIAPPE V1.1 (DM-90) Method description - Textual description of the method, which may extend a method defined in an external reference with specific parameters, e.g. growth stage, inoculation precise organ (leaf number)

Returns:

description

setDescription

public void setDescription(String description)

externalReferences

public BrAPIMethod externalReferences(List<BrAPIExternalReference> externalReferences)

getExternalReferences

public List<BrAPIExternalReference> getExternalReferences()

Get externalReferences

Returns:

externalReferences

setExternalReferences

public void setExternalReferences(List<BrAPIExternalReference> externalReferences)

formula

public BrAPIMethod formula(String formula)

getFormula

public String getFormula()

For computational methods i.e., when the method consists in assessing the trait by computing measurements, write the generic formula used for the calculation

Returns:

formula

setFormula

public void setFormula(String formula)

methodClass

public BrAPIMethod methodClass(String methodClass)

getMethodClass

public String getMethodClass()

Method class (examples: \"Measurement\", \"Counting\", \"Estimation\", \"Computation\", etc.)

Returns:

methodClass

setMethodClass

public void setMethodClass(String methodClass)

methodName

public BrAPIMethod methodName(String methodName)

getMethodName

public String getMethodName()

Human readable name for the method MIAPPE V1.1 (DM-88) Method Name of the method of observation

Returns:

methodName

setMethodName

public void setMethodName(String methodName)

ontologyReference

public BrAPIMethod ontologyReference(BrAPIOntologyReference ontologyReference)

methodPUI

public BrAPIMethod methodPUI(String methodPUI)

getMethodPUI

public String getMethodPUI()

The Permanent Unique Identifier of a Method, usually in the form of a URI

Returns:

methodPUI

setMethodPUI

public void setMethodPUI(String methodPUI)

getOntologyReference

public BrAPIOntologyReference getOntologyReference()

Get ontologyReference

Returns:

ontologyReference

setOntologyReference

public void setOntologyReference(BrAPIOntologyReference ontologyReference)

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object