Uses of Class
org.cicirello.permutations.Permutation

Packages that use Permutation

Package	Description
org.cicirello.permutations	Collection of classes related to representing and manipulating permutations.
org.cicirello.permutations.distance	Implementations of a variety of permutation distance measures.

Uses of Permutation in org.cicirello.permutations

Methods in org.cicirello.permutations that return Permutation

Modifier and Type	Method and Description
Permutation	Permutation.copy()
Permutation	Permutation.getInversePermutation() Computes a Permutation that is the inverse of this Permutation.
Permutation	PermutationIterator.next()

Methods in org.cicirello.permutations that return types with arguments of type Permutation

Modifier and Type	Method and Description
Iterator<Permutation>	Permutation.iterator() Returns an Iterator over all Permutations the length of this Permutation.

Methods in org.cicirello.permutations with parameters of type Permutation

Modifier and Type	Method and Description
protected void	Permutation.Mechanic.set(Permutation p, int[] permutation) Changes the state of the Permutation according to the contents of an array of int values.
protected void	Permutation.Mechanic.set(Permutation p, int index, int value) Changes the integer in one specific location of a Permutation.
protected void	Permutation.Mechanic.set(Permutation p, int index, int[] subpermutation) Changes a range of permutation elements.

Constructors in org.cicirello.permutations with parameters of type Permutation

Constructor and Description
Permutation(Permutation p) Initializes a permutation of n integers to be identical to a given permutation.
Permutation(Permutation p, int length) Initializes a permutation of the integers in the interval [0, length) based on their relative order in a permutation p.
PermutationIterator(Permutation p) Initializes a PermutationIterator to iterate over all permutations the same length as a given permutation.

Uses of Permutation in org.cicirello.permutations.distance

Methods in org.cicirello.permutations.distance with parameters of type Permutation

Modifier and Type	Method and Description
int	RTypeDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	ScrambleDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	CyclicEdgeDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	LeeDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	CyclicIndependentDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations, with cyclic independence: distance = min_{i in [0,N)} distance(p1,rotate(p2,i))
int	BlockInterchangeDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	CyclicRTypeDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	PermutationDistanceMeasurer.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	KendallTauDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	ReinsertionDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	ReversalDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	ReversalIndependentDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations, with reversal independence: distance = min { distance(p1,p2), distance(p1,reverse(p2)) }
int	ExactMatchDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	DeviationDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	SquaredDeviationDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	CyclicReversalIndependentDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations, with cyclic and reversal independence: distance = min_{i in [0,N)} { distance(p1,rotate(p2,i)), distance(p1,rotate(reverse(p2),i)) }
int	InterchangeDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
int	AcyclicEdgeDistance.distance(Permutation p1, Permutation p2) Measures the distance between two permutations.
double	ReversalIndependentDistanceDouble.distancef(Permutation p1, Permutation p2) Measures the distance between two permutations, with reversal independence: distance = min { distance(p1,p2), distance(p1,reverse(p2)) }
double	DeviationDistanceNormalized.distancef(Permutation p1, Permutation p2) Measures the distance between two permutations
double	CyclicIndependentDistance.distancef(Permutation p1, Permutation p2) Measures the distance between two permutations
double	CyclicIndependentDistanceDouble.distancef(Permutation p1, Permutation p2) Measures the distance between two permutations, with cyclic independence: distance = min_{i in [0,N)} distance(p1,rotate(p2,i))
double	ReversalIndependentDistance.distancef(Permutation p1, Permutation p2) Measures the distance between two permutations
double	PermutationDistanceMeasurerDouble.distancef(Permutation p1, Permutation p2) Measures the distance between two permutations
double	DeviationDistanceNormalized2005.distancef(Permutation p1, Permutation p2) Measures the distance between two permutations
double	CyclicReversalIndependentDistance.distancef(Permutation p1, Permutation p2) Measures the distance between two permutations
double	EditDistance.distancef(Permutation p1, Permutation p2) Measures the distance between two permutations
double	CyclicReversalIndependentDistanceDouble.distancef(Permutation p1, Permutation p2) Measures the distance between two permutations, with cyclic and reversal independence: distance = min_{i in [0,N)} { distance(p1,rotate(p2,i)), distance(p1,rotate(reverse(p2),i)) }
double	DeviationDistanceNormalized.normalizedDistance(Permutation p1, Permutation p2) Measures the distance between two permutations, normalized to the interval [0.0, 1.0].
double	NormalizedPermutationDistanceMeasurerDouble.normalizedDistance(Permutation p1, Permutation p2) Measures the distance between two permutations, normalized to the interval [0.0, 1.0].
double	DeviationDistanceNormalized2005.normalizedDistance(Permutation p1, Permutation p2) Measures the distance between two permutations, normalized to the interval [0.0, 1.0].