class |
AcyclicEdgeDistance |
Acyclic edge distance treats the permutations as if they represent sets of edges, and counts
the number of edges that differ.
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class |
BlockInterchangeDistance |
Block Interchange Distance is the minimum number of block interchanges
necessary to transform one permutation into the other.
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class |
CyclicEdgeDistance |
Cyclic edge distance treats the permutations as if they represent sets of edges, and counts
the number of edges that differ.
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class |
CyclicRTypeDistance |
Cyclic RType distance treats the permutations as if they represent sets of directed edges, and counts
the number of edges that differ.
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class |
DeviationDistance |
Deviation distance is the sum of the positional deviation of the permutation elements.
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class |
DeviationDistanceNormalized |
Normalized Deviation distance is the sum of the positional deviation of the permutation elements
divided by N-1 (where N is the length of the permutation).
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class |
DeviationDistanceNormalized2005 |
The original version of Normalized Deviation distance (Ronald, 1998) is the
sum of the positional deviation of the permutation elements
divided by N-1 (where N is the length of the permutation).
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class |
ExactMatchDistance |
Exact Match distance is an extension of Hamming distance but to non-binary strings, in this case, permutations.
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class |
InterchangeDistance |
Interchange distance is the minimum number of swaps necessary to transform one
permutation into the other.
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class |
KendallTauDistance |
Kendall Tau distance is sometimes also known as bubble sort distance, as it is
the number of adjacent swaps necessary to transform one permutation into the other.
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class |
LeeDistance |
Lee Distance is closely related to deviation distance.
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class |
ReinsertionDistance |
Reinsertion distance is the count of the number of removal/reinsertion operations
needed to transform one permutation into the other.
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class |
ReversalDistance |
Reversal Distance is the minimum number of subpermutation reversals necessary to transform one
permutation into the other.
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class |
RTypeDistance |
RType distance treats the permutations as if they represent sets of directed edges, and counts
the number of edges that differ.
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class |
ScrambleDistance |
Scramble Distance is the minimum number of random shufflings needed to transform one permutation into the other.
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class |
SquaredDeviationDistance |
Squared Deviation distance is the sum of the squares of the positional deviations of the permutation elements.
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class |
WeightedKendallTauDistance |
This class implements the weighted Kendall tau distance.
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