001/** 002 * Copyright (c) 2007-2008, Regents of the University of Colorado 003 * All rights reserved. 004 * 005 * Redistribution and use in source and binary forms, with or without 006 * modification, are permitted provided that the following conditions are met: 007 * 008 * Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 009 * Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. 010 * Neither the name of the University of Colorado at Boulder nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. 011 * 012 * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 013 * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 014 * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 015 * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE 016 * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 017 * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF 018 * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS 019 * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN 020 * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) 021 * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE 022 * POSSIBILITY OF SUCH DAMAGE. 023 */ 024package org.cleartk.corpus.genia.pos.util; 025 026import java.util.ArrayList; 027import java.util.Collections; 028import java.util.List; 029 030/** 031 * <br> 032 * Copyright (c) 2007-2008, Regents of the University of Colorado <br> 033 * All rights reserved. 034 */ 035 036public class GeniaParse { 037 038 String medline; 039 040 String text; 041 042 String xml; 043 044 List<GeniaTag> posTags; 045 046 List<GeniaTag> semTags; 047 048 List<GeniaSentence> sentences; 049 050 public GeniaParse() { 051 posTags = new ArrayList<GeniaTag>(); 052 semTags = new ArrayList<GeniaTag>(); 053 sentences = new ArrayList<GeniaSentence>(); 054 } 055 056 public String getMedline() { 057 return medline; 058 } 059 060 public void setMedline(String medline) { 061 this.medline = medline; 062 } 063 064 public List<GeniaTag> getPosTags() { 065 return Collections.unmodifiableList(posTags); 066 } 067 068 public void addPosTags(List<GeniaTag> pTags) { 069 this.posTags.addAll(pTags); 070 } 071 072 public List<GeniaTag> getSemTags() { 073 return Collections.unmodifiableList(semTags); 074 } 075 076 public void addSemTags(List<GeniaTag> sTags) { 077 this.semTags.addAll(sTags); 078 } 079 080 public String getText() { 081 return text; 082 } 083 084 public void setText(String text) { 085 this.text = text; 086 } 087 088 public void addSentence(GeniaSentence sentence) { 089 sentences.add(sentence); 090 } 091 092 public List<GeniaSentence> getSentences() { 093 return Collections.unmodifiableList(sentences); 094 } 095 096 public String getXml() { 097 return xml; 098 } 099 100 public void setXml(String xml) { 101 this.xml = xml; 102 } 103}