Uses of Class
org.colomoto.biolqm.io.BaseExporter

Packages that use BaseExporter

Package	Description
org.colomoto.biolqm.io.bnet	The format used by boolnet and pyboolnet
org.colomoto.biolqm.io.booleannet	The format used by booleannet and related tools in Reka Albert's group
org.colomoto.biolqm.io.boolsim	The format used by boolsim/GenYsis.
org.colomoto.biolqm.io.cnet	The format used by boolnet and pyboolnet
org.colomoto.biolqm.io.functions	logical functions.
org.colomoto.biolqm.io.gna	GNA (non-xml) support.
org.colomoto.biolqm.io.implicanttables	Implicant table format.
org.colomoto.biolqm.io.maboss	The format used by MaBoSS - https://maboss.curie.fr/
org.colomoto.biolqm.io.mnet	A custom text format for multi-valued networks
org.colomoto.biolqm.io.petrinet	Petri net support.
org.colomoto.biolqm.io.pint	The format used by Pint - http://loicpauleve.name/pint
org.colomoto.biolqm.io.sbml	SBML qual support.
org.colomoto.biolqm.io.truthtable	TruthTable file reader.

Uses of BaseExporter in org.colomoto.biolqm.io.bnet

Subclasses of BaseExporter in org.colomoto.biolqm.io.bnet

Modifier and Type	Class and Description
class	BNetExport Export logical model into a raw list of functions.

Uses of BaseExporter in org.colomoto.biolqm.io.booleannet

Subclasses of BaseExporter in org.colomoto.biolqm.io.booleannet

Modifier and Type	Class and Description
class	BooleanNetExport Export logical model into a raw list of functions.

Uses of BaseExporter in org.colomoto.biolqm.io.boolsim

Subclasses of BaseExporter in org.colomoto.biolqm.io.boolsim

Modifier and Type	Class and Description
class	BoolSimExport Export logical model into the boolsim format.

Uses of BaseExporter in org.colomoto.biolqm.io.cnet

Subclasses of BaseExporter in org.colomoto.biolqm.io.cnet

Modifier and Type	Class and Description
class	CNetExport Export logical model into cnet truth tables.

Uses of BaseExporter in org.colomoto.biolqm.io.functions

Subclasses of BaseExporter in org.colomoto.biolqm.io.functions

Modifier and Type	Class and Description
class	BooleanFunctionExport Export logical model into a raw list of functions.

Uses of BaseExporter in org.colomoto.biolqm.io.gna

Subclasses of BaseExporter in org.colomoto.biolqm.io.gna

Modifier and Type	Class and Description
class	GNAExport Exports a logical model into the non-xml GNA format.

Uses of BaseExporter in org.colomoto.biolqm.io.implicanttables

Subclasses of BaseExporter in org.colomoto.biolqm.io.implicanttables

Modifier and Type	Class and Description
class	ImplicantTableExport Export logical model into lists of implicant tables.

Uses of BaseExporter in org.colomoto.biolqm.io.maboss

Subclasses of BaseExporter in org.colomoto.biolqm.io.maboss

Modifier and Type	Class and Description
class	MaBoSSEncoder Export a Boolean(ized) LogicalModel into MaBoSS format

Uses of BaseExporter in org.colomoto.biolqm.io.mnet

Subclasses of BaseExporter in org.colomoto.biolqm.io.mnet

Modifier and Type	Class and Description
class	MNetExport Export logical model into a list of multi-valued functions.

Uses of BaseExporter in org.colomoto.biolqm.io.petrinet

Subclasses of BaseExporter in org.colomoto.biolqm.io.petrinet

Modifier and Type	Class and Description
class	AbstractPNEncoder Export a regulatory graph to petri net (shared methods).
class	PNEncoderAPNN Export a regulatory graph to petri net (APNN format).
class	PNEncoderINA Export a regulatory graph to Petri net (INA format).
class	PNEncoderPNML Export a regulatory graph to Petri net (PNML format).

Uses of BaseExporter in org.colomoto.biolqm.io.pint

Subclasses of BaseExporter in org.colomoto.biolqm.io.pint

Modifier and Type	Class and Description
class	PintExport Export logical model into the Pint format.

Uses of BaseExporter in org.colomoto.biolqm.io.sbml

Subclasses of BaseExporter in org.colomoto.biolqm.io.sbml

Modifier and Type	Class and Description
class	SBMLqualExport SBML export using JSBML and the "qual" extension.

Uses of BaseExporter in org.colomoto.biolqm.io.truthtable

Subclasses of BaseExporter in org.colomoto.biolqm.io.truthtable

Modifier and Type	Class and Description
class	TruthTableExport Exports a logical model into the Truth Table format.