Uses of Package
org.colomoto.biolqm.io

Packages that use org.colomoto.biolqm.io

Package	Description
org.colomoto.biolqm	Core for the bioLQM toolkit: Main data structures for Logical Models Service loader and manager Launcher and Command-Line Interface Script mode
org.colomoto.biolqm.io	Input/Output for Logical Model.
org.colomoto.biolqm.io.bnet	The format used by boolnet and pyboolnet
org.colomoto.biolqm.io.booleannet	The format used by booleannet and related tools in Reka Albert's group
org.colomoto.biolqm.io.boolsim	The format used by boolsim/GenYsis.
org.colomoto.biolqm.io.cnet	The format used by boolnet and pyboolnet
org.colomoto.biolqm.io.functions	logical functions.
org.colomoto.biolqm.io.ginml	GINML support.
org.colomoto.biolqm.io.gna	GNA (non-xml) support.
org.colomoto.biolqm.io.implicanttables	Implicant table format.
org.colomoto.biolqm.io.maboss	The format used by MaBoSS - https://maboss.curie.fr/
org.colomoto.biolqm.io.mnet	A custom text format for multi-valued networks
org.colomoto.biolqm.io.petrinet	Petri net support.
org.colomoto.biolqm.io.pint	The format used by Pint - http://loicpauleve.name/pint
org.colomoto.biolqm.io.sbml	SBML qual support.
org.colomoto.biolqm.io.truthtable	TruthTable file reader.
org.colomoto.biolqm.service

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm

Class and Description
LogicalModelFormat Description of an available file format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io

Class and Description
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.
ModelLoader Model loaders are tasks dedicated to loading a model from a specific format.
StreamProvider Provide Input or Output stream objects for the loading and saving operations filters.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.bnet

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
BaseLoader Base class for model loader.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.
ModelLoader Model loaders are tasks dedicated to loading a model from a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.booleannet

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
BaseLoader Base class for model loader.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.
ModelLoader Model loaders are tasks dedicated to loading a model from a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.boolsim

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
BaseLoader Base class for model loader.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.
ModelLoader Model loaders are tasks dedicated to loading a model from a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.cnet

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
BaseLoader Base class for model loader.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.
ModelLoader Model loaders are tasks dedicated to loading a model from a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.functions

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
BaseLoader Base class for model loader.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.
ModelLoader Model loaders are tasks dedicated to loading a model from a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.ginml

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
LogicalModelFormat Description of an available file format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.gna

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.implicanttables

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
BaseLoader Base class for model loader.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.
ModelLoader Model loaders are tasks dedicated to loading a model from a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.maboss

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.mnet

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
BaseLoader Base class for model loader.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.
ModelLoader Model loaders are tasks dedicated to loading a model from a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.petrinet

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.pint

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.sbml

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
BaseLoader Base class for model loader.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.
ModelLoader Model loaders are tasks dedicated to loading a model from a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.io.truthtable

Class and Description
AbstractFormat Simple helper to fill in the boring parts of format declaration classes.
BaseExporter Base class for model exporters.
BaseLoader Base class for model loader.
LogicalModelFormat Description of an available file format.
ModelExporter Model exporters are tasks dedicated to exporting a model in a specific format.
ModelLoader Model loaders are tasks dedicated to loading a model from a specific format.

Classes in org.colomoto.biolqm.io used by org.colomoto.biolqm.service

Class and Description
LogicalModelFormat Description of an available file format.