Uses of Class
org.colomoto.biolqm.modifier.BaseModifier

Packages that use BaseModifier

Package	Description
org.colomoto.biolqm.modifier.booleanize	Construct Boolean versions of Multi-valued models
org.colomoto.biolqm.modifier.buffer	Expand a model using "buffer components".
org.colomoto.biolqm.modifier.perturbation	Perturbation of logical models: local modifications of its logical functions.
org.colomoto.biolqm.modifier.reduction	model modification: remove components from the core.
org.colomoto.biolqm.modifier.reverse	model modification: creates a new model capable of generating the reverse dynamics.
org.colomoto.biolqm.modifier.sanitize	Cleanups and sanity-checks, preserving the same model
org.colomoto.biolqm.modifier.submodel
org.colomoto.biolqm.modifier.subspace

Uses of BaseModifier in org.colomoto.biolqm.modifier.booleanize

Subclasses of BaseModifier in org.colomoto.biolqm.modifier.booleanize

Modifier and Type	Class and Description
class	BooleanizeModifier Construct a Boolean version of a multi-valued model.

Uses of BaseModifier in org.colomoto.biolqm.modifier.buffer

Subclasses of BaseModifier in org.colomoto.biolqm.modifier.buffer

Modifier and Type	Class and Description
class	BufferingModifier

Uses of BaseModifier in org.colomoto.biolqm.modifier.perturbation

Subclasses of BaseModifier in org.colomoto.biolqm.modifier.perturbation

Modifier and Type	Class and Description
class	PerturbationModifier

Uses of BaseModifier in org.colomoto.biolqm.modifier.reduction

Subclasses of BaseModifier in org.colomoto.biolqm.modifier.reduction

Modifier and Type	Class and Description
class	PatternReduction
class	ReductionModifier

Uses of BaseModifier in org.colomoto.biolqm.modifier.reverse

Subclasses of BaseModifier in org.colomoto.biolqm.modifier.reverse

Modifier and Type	Class and Description
class	ReverseModifier Wrap ReverseOperation to properly create a new model capable of generating the reverse dynamics.

Uses of BaseModifier in org.colomoto.biolqm.modifier.sanitize

Subclasses of BaseModifier in org.colomoto.biolqm.modifier.sanitize

Modifier and Type	Class and Description
class	SanitizeModifier

Uses of BaseModifier in org.colomoto.biolqm.modifier.submodel

Subclasses of BaseModifier in org.colomoto.biolqm.modifier.submodel

Modifier and Type	Class and Description
class	SubmodelModifier Given a list of component names, this modifier will extract a sub-model containing: - the given list of components, - all dependent components of these nodes (involved in the logical functions) as input components (if they are not fixed values).

Uses of BaseModifier in org.colomoto.biolqm.modifier.subspace

Subclasses of BaseModifier in org.colomoto.biolqm.modifier.subspace

Modifier and Type	Class and Description
class	SubSpaceModifier Model Modifier to restrict a model into a subspace.