Package org.colomoto.biolqm.modifier.perturbation

Perturbation of logical models: local modifications of its logical functions.

See: Description

Interface Summary

Interface	Description
LogicalModelPerturbation	Common interface for perturbations.

Class Summary

Class	Description
FixedValuePerturbation	Simple perturbation to fix the value of a component.
InteractionPerturbation	A perturbation which removes the effect of a component on another (i.e.
MultiplePerturbation<P extends LogicalModelPerturbation>	A multiple perturbation is a list of perturbations all applied together.
PerturbationModifier
PerturbationService	Service to apply perturbations to Logical Models.
RangePerturbation	Simple perturbation to restrict the value of a component in a range.
RangeRestrictionOperation	Operation used to restrict the values reached in a MDD into a specific range.
RegulatorRemovalOperation	Operation used to remove a regulator (by assigning it a fixed value) from a MDD.

Package org.colomoto.biolqm.modifier.perturbation Description

Perturbation of logical models: local modifications of its logical functions. This package contains simple ModelModifier implementation to define classical model perturbations. Perturbations can be simple KO, ectopic expressions or more complex modifications.