org.colomoto.biolqm.modifier.sanitize

Class SanitizeService

java.lang.Object

org.colomoto.biolqm.service.BaseService

org.colomoto.biolqm.modifier.sanitize.SanitizeService

All Implemented Interfaces:

ModelModifierService, Service

@MetaInfServices(value=ModelModifierService.class)
public class SanitizeService
extends BaseService
implements ModelModifierService

A service for model cleanups and sanity checks. It currently allows to build valid IDs based on components names, improving the readability of some SBML models.

Author:

Aurelien Naldi

Field Summary

Fields

Modifier and Type	Field and Description
static String	ID The identifier used to retrieve this service by name

Constructor Summary

Constructors

Constructor and Description
SanitizeService() Public constructor which should only be used for service discovery.

Method Summary

Modifier and Type	Method and Description
ModelModifier	getModifier(LogicalModel model) Get a new modifier object.

Methods inherited from class org.colomoto.biolqm.service.BaseService

getAliases, getDescription, getID, getMultivaluedSupport, getName, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.colomoto.biolqm.modifier.ModelModifierService

getModifier, modify, modify

Methods inherited from interface org.colomoto.biolqm.service.Service

getAliases, getDescription, getID, getMultivaluedSupport, getName

Field Detail

ID

public static final String ID

The identifier used to retrieve this service by name

See Also:

Constant Field Values

Constructor Detail

SanitizeService

public SanitizeService()

Public constructor which should only be used for service discovery.

Method Detail

getModifier

public ModelModifier getModifier(LogicalModel model)

Description copied from interface: ModelModifierService

Get a new modifier object.

Specified by:

getModifier in interface ModelModifierService

Parameters:

model - the model to modify

Returns:

a modifier instance using the default parameters