Package org.colomoto.biolqm

Core for the bioLQM toolkit: Main data structures for Logical Models Service loader and manager Launcher and Command-Line Interface Script mode

See: Description

Interface Summary

Interface	Description
LogicalModel	A LogicalModel is a ready to use object containing all necessary information to perform simulations and analysis, without the editing facilities provided by a full RegulatoryGraph.
NodeInfoHolder	An object containing a NodeInfo

Class Summary

Class	Description
ConnectivityMatrix	Build and consult regulatory relations between variables in a Logical Model.
LogicalModelComparator	Test if two logical models share the same variables and equivalent functions
LogicalModelImpl	Implementation of the LogicalModel interface.
LQMLauncher	Entry point to launch the bioLQM toolbox.
ModelLayout	Simple storage for layout information
NodeInfo	Contains the basic information of a regulatory component : nodeID : a unique identifier for the gene display name (optional) max : the maximal activity level

Package org.colomoto.biolqm Description

Core for the bioLQM toolkit:

• Main data structures for Logical Models
• Service loader and manager
• Launcher and Command-Line Interface
• Script mode