Uses of Package
org.colomoto.biolqm.service

Packages that use org.colomoto.biolqm.service

Package	Description
org.colomoto.biolqm.io	Input/Output for Logical Model.
org.colomoto.biolqm.io.bnet	The format used by boolnet and pyboolnet
org.colomoto.biolqm.io.booleannet	The format used by booleannet and related tools in Reka Albert's group
org.colomoto.biolqm.io.boolsim	The format used by boolsim/GenYsis.
org.colomoto.biolqm.io.cnet	The format used by boolnet and pyboolnet
org.colomoto.biolqm.io.functions	logical functions.
org.colomoto.biolqm.io.ginml	GINML support.
org.colomoto.biolqm.io.gna	GNA (non-xml) support.
org.colomoto.biolqm.io.implicanttables	Implicant table format.
org.colomoto.biolqm.io.maboss	The format used by MaBoSS - https://maboss.curie.fr/
org.colomoto.biolqm.io.mnet	A custom text format for multi-valued networks
org.colomoto.biolqm.io.petrinet	Petri net support.
org.colomoto.biolqm.io.pint	The format used by Pint - http://loicpauleve.name/pint
org.colomoto.biolqm.io.sbml	SBML qual support.
org.colomoto.biolqm.io.truthtable	TruthTable file reader.
org.colomoto.biolqm.modifier	Modifications of logical models.
org.colomoto.biolqm.modifier.booleanize	Construct Boolean versions of Multi-valued models
org.colomoto.biolqm.modifier.buffer	Expand a model using "buffer components".
org.colomoto.biolqm.modifier.perturbation	Perturbation of logical models: local modifications of its logical functions.
org.colomoto.biolqm.modifier.reduction	model modification: remove components from the core.
org.colomoto.biolqm.modifier.reverse	model modification: creates a new model capable of generating the reverse dynamics.
org.colomoto.biolqm.modifier.sanitize	Cleanups and sanity-checks, preserving the same model
org.colomoto.biolqm.modifier.submodel
org.colomoto.biolqm.modifier.subspace
org.colomoto.biolqm.service
org.colomoto.biolqm.tool	Tool definition, used to run actions from the command-line interface.
org.colomoto.biolqm.tool.attractor	Identification of the stable states of a logical model.
org.colomoto.biolqm.tool.fixpoints	Identification of the stable states of a logical model.
org.colomoto.biolqm.tool.simulation.deterministic	Implementation of updating schemes: update the state of a model (i.e.
org.colomoto.biolqm.tool.simulation.random	Implementation of updating schemes: update the state of a model (i.e.
org.colomoto.biolqm.tool.trapspaces

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
MultivaluedSupport
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.bnet

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.booleannet

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.boolsim

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.cnet

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.functions

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.ginml

Class and Description
BaseService Common base class for all services, to store the associated metadata
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.gna

Class and Description
BaseService Common base class for all services, to store the associated metadata
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.implicanttables

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.maboss

Class and Description
BaseService Common base class for all services, to store the associated metadata
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.mnet

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.petrinet

Class and Description
BaseService Common base class for all services, to store the associated metadata
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.pint

Class and Description
BaseService Common base class for all services, to store the associated metadata
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.sbml

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.io.truthtable

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.modifier

Class and Description
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.modifier.booleanize

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.modifier.buffer

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.modifier.perturbation

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.modifier.reduction

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.modifier.reverse

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.modifier.sanitize

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.modifier.submodel

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.modifier.subspace

Class and Description
BaseService Common base class for all services, to store the associated metadata
ModelTask Model Tasks are tasks which return a model.
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.service

Class and Description
MultivaluedSupport
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.tool

Class and Description
BaseService Common base class for all services, to store the associated metadata
MultivaluedSupport
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.tool.attractor

Class and Description
BaseService Common base class for all services, to store the associated metadata
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.tool.fixpoints

Class and Description
BaseService Common base class for all services, to store the associated metadata
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.tool.simulation.deterministic

Class and Description
BaseService Common base class for all services, to store the associated metadata
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.tool.simulation.random

Class and Description
BaseService Common base class for all services, to store the associated metadata
Service Simple service description interface.

Classes in org.colomoto.biolqm.service used by org.colomoto.biolqm.tool.trapspaces

Class and Description
BaseService Common base class for all services, to store the associated metadata
Service Simple service description interface.