org.colomoto.biolqm.tool.simulation.deterministic

Class DeterministicSimulation

java.lang.Object

org.colomoto.biolqm.tool.simulation.deterministic.DeterministicSimulation

All Implemented Interfaces:

Iterable<byte[]>

public class DeterministicSimulation
extends Object
implements Iterable<byte[]>

A simple simulation engine for deterministic updaters (with a single successor). It will stop when reaching a stable state, a keeps a partial memory to detect cycles up to the specified length. If no attractor is identified, it stops after reaching the max number of iterations.

Author:

Aurelien Naldi

Constructor Summary

Constructors

Constructor and Description
DeterministicSimulation(DeterministicUpdater updater, byte[] init)
DeterministicSimulation(DeterministicUpdater updater, byte[] init, int max_steps)
DeterministicSimulation(DeterministicUpdater updater, byte[] init, int length, int max_steps)

Method Summary

Modifier and Type	Method and Description
List<NodeInfo>	getNodes()
Iterator<byte[]>	iterator()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.lang.Iterable

forEach, spliterator

Constructor Detail

DeterministicSimulation

public DeterministicSimulation(DeterministicUpdater updater,
                               byte[] init)

DeterministicSimulation

public DeterministicSimulation(DeterministicUpdater updater,
                               byte[] init,
                               int max_steps)

DeterministicSimulation

public DeterministicSimulation(DeterministicUpdater updater,
                               byte[] init,
                               int length,
                               int max_steps)

Method Detail

getNodes

public List<NodeInfo> getNodes()

iterator

public Iterator<byte[]> iterator()

Specified by:

iterator in interface Iterable<byte[]>