| Package | Description |
|---|---|
| org.colomoto.biolqm.tool.simulation |
Some tools to run simulations on logical models.
|
| org.colomoto.biolqm.tool.simulation.deterministic |
Implementation of updating schemes: update the state of a model (i.e.
|
| Modifier and Type | Method and Description |
|---|---|
static DeterministicUpdater |
UpdaterFactory.getDeterministicUpdater(LogicalModel model,
String s) |
| Modifier and Type | Class and Description |
|---|---|
class |
BlockSequentialUpdater
Updater for a block-sequential scheme: there are groups of nodes updated in
synchronous way, but the different groups are updated in sequential way, one after
another.
|
class |
DeterministicPriorityUpdater |
class |
SequentialUpdater
Updater for the sequential scheme: all components are updated one after the other in a single successor.
|
class |
SynchronousUpdater
Updater for the synchronous scheme: all possible changes are applied in a single successor
|
| Constructor and Description |
|---|
DeterministicSimulation(DeterministicUpdater updater,
byte[] init) |
DeterministicSimulation(DeterministicUpdater updater,
byte[] init,
int max_steps) |
DeterministicSimulation(DeterministicUpdater updater,
byte[] init,
int length,
int max_steps) |
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