| Package | Description |
|---|---|
| org.colomoto.biolqm.tool.simulation |
Some tools to run simulations on logical models.
|
| org.colomoto.biolqm.tool.simulation.multiplesuccessor |
Implementation of updating schemes: update the state of a model (i.e.
|
| org.colomoto.biolqm.tool.simulation.random |
Implementation of updating schemes: update the state of a model (i.e.
|
| Modifier and Type | Method and Description |
|---|---|
static MultipleSuccessorsUpdater |
UpdaterFactory.getMultipleSuccessorUpdater(LogicalModel model,
String s) |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractMultipleSuccessorUpdater
Base class for updaters which yield multiple successors.
|
class |
AsynchronousUpdater
Updater for the asynchronous scheme: all possible changes are applied separately.
|
class |
CompleteUpdater
Updater for the "complete" mode: include all asynchronous, synchronous and partially synchronous changes.
|
class |
PriorityUpdater
Draft for a priority updater: components are grouped in groups, which can be
updated synchronously or asynchronously.
|
| Constructor and Description |
|---|
MultipleSuccessorSimulation(MultipleSuccessorsUpdater updater) |
MultipleSuccessorSimulation(MultipleSuccessorsUpdater updater,
SimulationStrategy strategy) |
| Constructor and Description |
|---|
RandomUpdaterWrapper(MultipleSuccessorsUpdater updater) |
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