edu.emory.cci.aiw.i2b2etl.dest

Class I2b2QueryResultsHandler

java.lang.Object

org.protempa.dest.AbstractQueryResultsHandler

edu.emory.cci.aiw.i2b2etl.dest.I2b2QueryResultsHandler

All Implemented Interfaces:

AutoCloseable, org.protempa.dest.QueryResultsHandler

public final class I2b2QueryResultsHandler
extends org.protempa.dest.AbstractQueryResultsHandler

Author:

Andrew Post

Method Summary

Modifier and Type	Method and Description
void	close()
void	finish()
String	getId()
void	handleQueryResult(String keyId, List<org.protempa.proposition.Proposition> propositions, Map<org.protempa.proposition.Proposition,List<org.protempa.proposition.Proposition>> forwardDerivations, Map<org.protempa.proposition.Proposition,List<org.protempa.proposition.Proposition>> backwardDerivations, Map<org.protempa.proposition.UniqueId,org.protempa.proposition.Proposition> references)
void	start(Collection<org.protempa.PropositionDefinition> propDefs) Builds most of the concept tree, truncates the data tables, opens a connection to the i2b2 project database, and does some other prep.

Methods inherited from class org.protempa.dest.AbstractQueryResultsHandler

cancel, getDisplayName, validate

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

getId

public String getId()

Specified by:

getId in interface org.protempa.dest.QueryResultsHandler

Overrides:

getId in class org.protempa.dest.AbstractQueryResultsHandler

start

public void start(Collection<org.protempa.PropositionDefinition> propDefs)
           throws org.protempa.dest.QueryResultsHandlerProcessingException

Builds most of the concept tree, truncates the data tables, opens a connection to the i2b2 project database, and does some other prep. This method is called before the first call to handleQueryResult(String, java.util.List, java.util.Map, java.util.Map, java.util.Map).

Specified by:

start in interface org.protempa.dest.QueryResultsHandler

Overrides:

start in class org.protempa.dest.AbstractQueryResultsHandler

Throws:

org.protempa.dest.QueryResultsHandlerProcessingException

handleQueryResult

public void handleQueryResult(String keyId,
                              List<org.protempa.proposition.Proposition> propositions,
                              Map<org.protempa.proposition.Proposition,List<org.protempa.proposition.Proposition>> forwardDerivations,
                              Map<org.protempa.proposition.Proposition,List<org.protempa.proposition.Proposition>> backwardDerivations,
                              Map<org.protempa.proposition.UniqueId,org.protempa.proposition.Proposition> references)
                       throws org.protempa.dest.QueryResultsHandlerProcessingException

Throws:

org.protempa.dest.QueryResultsHandlerProcessingException

finish

public void finish()
            throws org.protempa.dest.QueryResultsHandlerProcessingException

Specified by:

finish in interface org.protempa.dest.QueryResultsHandler

Overrides:

finish in class org.protempa.dest.AbstractQueryResultsHandler

Throws:

org.protempa.dest.QueryResultsHandlerProcessingException

close

public void close()
           throws org.protempa.dest.QueryResultsHandlerCloseException

Specified by:

close in interface AutoCloseable

Specified by:

close in interface org.protempa.dest.QueryResultsHandler

Overrides:

close in class org.protempa.dest.AbstractQueryResultsHandler

Throws:

org.protempa.dest.QueryResultsHandlerCloseException