edu.emory.cci.aiw.cvrg.eureka.common.comm.clients

Class ServicesClient

java.lang.Object

org.eurekaclinical.common.comm.clients.EurekaClinicalClient

edu.emory.cci.aiw.cvrg.eureka.common.comm.clients.EurekaClient

edu.emory.cci.aiw.cvrg.eureka.common.comm.clients.ServicesClient

All Implemented Interfaces:

AutoCloseable

public class ServicesClient
extends EurekaClient

Author:

hrathod

Constructor Summary

Constructors

Constructor and Description
ServicesClient(String inServicesUrl)

Method Summary

Modifier and Type	Method and Description
URI	createDestination(org.eurekaclinical.eureka.client.comm.Destination destination)
void	deleteDestination(String destinationId)
void	deleteUserPhenotype(Long inId)
List<org.eurekaclinical.eureka.client.comm.CohortDestination>	getCohortDestinations()
org.eurekaclinical.eureka.client.comm.Destination	getDestination(String destinationId)
List<org.eurekaclinical.eureka.client.comm.Destination>	getDestinations()
List<FrequencyType>	getFrequencyTypesAsc()
List<org.eurekaclinical.eureka.client.comm.I2B2Destination>	getI2B2Destinations()
org.eurekaclinical.eureka.client.comm.Job	getJob(Long jobId)
List<org.eurekaclinical.eureka.client.comm.Job>	getJobs()
List<org.eurekaclinical.eureka.client.comm.Job>	getJobsDesc()
org.eurekaclinical.eureka.client.comm.Statistics	getJobStats(Long jobId, String propId)
List<org.eurekaclinical.eureka.client.comm.Job>	getLatestJob()
List<org.eurekaclinical.eureka.client.comm.Phenotype>	getPhenotypes(String[] inKeys, boolean summarized)
RelationOperator	getRelationOperator(Long inId)
RelationOperator	getRelationOperatorByName(String inName)
List<RelationOperator>	getRelationOperatorsAsc()
protected URI	getResourceUrl()
org.eurekaclinical.common.comm.Role	getRole(Long inRoleId)
org.eurekaclinical.common.comm.Role	getRoleByName(String name)
List<org.eurekaclinical.common.comm.Role>	getRoles()
org.eurekaclinical.eureka.client.comm.SourceConfig	getSourceConfig(String sourceConfigId)
List<org.eurekaclinical.eureka.client.comm.SourceConfigParams>	getSourceConfigParams()
List<org.eurekaclinical.eureka.client.comm.SourceConfig>	getSourceConfigs()
org.eurekaclinical.eureka.client.comm.SystemPhenotype	getSystemPhenotype(String inKey, boolean summarize)
List<org.eurekaclinical.eureka.client.comm.SystemPhenotype>	getSystemPhenotypes()
List<org.eurekaclinical.eureka.client.comm.SystemPhenotype>	getSystemPhenotypes(List<String> inKeys, boolean summarize)
List<String>	getSystemPhenotypeSearchResults(String searchKey)
List<org.eurekaclinical.eureka.client.comm.SystemPhenotype>	getSystemPhenotypeSearchResultsBySearchKey(String searchKey)
ThresholdsOperator	getThresholdsOperator(Long inId)
ThresholdsOperator	getThresholdsOperatorByName(String inName)
List<ThresholdsOperator>	getThresholdsOperators()
TimeUnit	getTimeUnit(Long inId)
TimeUnit	getTimeUnitByName(String inName)
List<TimeUnit>	getTimeUnitsAsc()
org.eurekaclinical.eureka.client.comm.Phenotype	getUserPhenotype(String inKey, boolean summarized)
List<org.eurekaclinical.eureka.client.comm.Phenotype>	getUserPhenotypes(boolean summarized)
ValueComparator	getValueComparator(Long inId)
ValueComparator	getValueComparatorByName(String inName)
List<ValueComparator>	getValueComparatorsAsc()
URI	saveUserPhenotype(org.eurekaclinical.eureka.client.comm.Phenotype inPhenotype)
URI	submitJob(org.eurekaclinical.eureka.client.comm.JobSpec inUpload)
void	updateDestination(org.eurekaclinical.eureka.client.comm.Destination destination)
void	updateUserPhenotype(Long inId, org.eurekaclinical.eureka.client.comm.Phenotype inPhenotype)
void	verifyUser(String inCode)

Methods inherited from class org.eurekaclinical.common.comm.clients.EurekaClinicalClient

close, doDelete, doDelete, doDeleteForProxy, doGet, doGet, doGet, doGet, doGet, doGet, doGet, doGet, doGetForProxy, doGetResponse, doGetResponse, doPost, doPost, doPost, doPost, doPost, doPost, doPost, doPostCreate, doPostCreate, doPostCreateMultipart, doPostCreateMultipart, doPostCreateMultipart, doPostForm, doPostForm, doPostForProxy, doPostMultipart, doPostMultipart, doPostMultipart, doPostMultipart, doPut, doPut, doPut, doPutForProxy, errorIfStatusEqualTo, errorIfStatusNotEqualTo, extractId

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ServicesClient

public ServicesClient(String inServicesUrl)

Method Detail

getResourceUrl

protected URI getResourceUrl()

Specified by:

getResourceUrl in class org.eurekaclinical.common.comm.clients.EurekaClinicalClient

verifyUser

public void verifyUser(String inCode)
                throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getRoles

public List<org.eurekaclinical.common.comm.Role> getRoles()
                                                   throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getRole

public org.eurekaclinical.common.comm.Role getRole(Long inRoleId)
                                            throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getRoleByName

public org.eurekaclinical.common.comm.Role getRoleByName(String name)
                                                  throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

submitJob

public URI submitJob(org.eurekaclinical.eureka.client.comm.JobSpec inUpload)
              throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getJob

public org.eurekaclinical.eureka.client.comm.Job getJob(Long jobId)
                                                 throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getJobStats

public org.eurekaclinical.eureka.client.comm.Statistics getJobStats(Long jobId,
                                                                    String propId)
                                                             throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getJobs

public List<org.eurekaclinical.eureka.client.comm.Job> getJobs()
                                                        throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getJobsDesc

public List<org.eurekaclinical.eureka.client.comm.Job> getJobsDesc()
                                                            throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getLatestJob

public List<org.eurekaclinical.eureka.client.comm.Job> getLatestJob()
                                                             throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getPhenotypes

public List<org.eurekaclinical.eureka.client.comm.Phenotype> getPhenotypes(String[] inKeys,
                                                                           boolean summarized)
                                                                    throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getUserPhenotypes

public List<org.eurekaclinical.eureka.client.comm.Phenotype> getUserPhenotypes(boolean summarized)
                                                                        throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getUserPhenotype

public org.eurekaclinical.eureka.client.comm.Phenotype getUserPhenotype(String inKey,
                                                                        boolean summarized)
                                                                 throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

saveUserPhenotype

public URI saveUserPhenotype(org.eurekaclinical.eureka.client.comm.Phenotype inPhenotype)
                      throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

updateUserPhenotype

public void updateUserPhenotype(Long inId,
                                org.eurekaclinical.eureka.client.comm.Phenotype inPhenotype)
                         throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

deleteUserPhenotype

public void deleteUserPhenotype(Long inId)
                         throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getSystemPhenotypes

public List<org.eurekaclinical.eureka.client.comm.SystemPhenotype> getSystemPhenotypes()
                                                                                throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getSystemPhenotypes

public List<org.eurekaclinical.eureka.client.comm.SystemPhenotype> getSystemPhenotypes(List<String> inKeys,
                                                                                       boolean summarize)
                                                                                throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getSystemPhenotype

public org.eurekaclinical.eureka.client.comm.SystemPhenotype getSystemPhenotype(String inKey,
                                                                                boolean summarize)
                                                                         throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getTimeUnitsAsc

public List<TimeUnit> getTimeUnitsAsc()
                               throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getTimeUnit

public TimeUnit getTimeUnit(Long inId)
                     throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getTimeUnitByName

public TimeUnit getTimeUnitByName(String inName)
                           throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getRelationOperatorsAsc

public List<RelationOperator> getRelationOperatorsAsc()
                                               throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getRelationOperator

public RelationOperator getRelationOperator(Long inId)
                                     throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getRelationOperatorByName

public RelationOperator getRelationOperatorByName(String inName)
                                           throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getThresholdsOperators

public List<ThresholdsOperator> getThresholdsOperators()
                                                throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getThresholdsOperator

public ThresholdsOperator getThresholdsOperator(Long inId)
                                         throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getThresholdsOperatorByName

public ThresholdsOperator getThresholdsOperatorByName(String inName)
                                               throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getValueComparatorsAsc

public List<ValueComparator> getValueComparatorsAsc()
                                             throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getValueComparator

public ValueComparator getValueComparator(Long inId)
                                   throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getValueComparatorByName

public ValueComparator getValueComparatorByName(String inName)
                                         throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getFrequencyTypesAsc

public List<FrequencyType> getFrequencyTypesAsc()
                                         throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getSourceConfigs

public List<org.eurekaclinical.eureka.client.comm.SourceConfig> getSourceConfigs()
                                                                          throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getSourceConfig

public org.eurekaclinical.eureka.client.comm.SourceConfig getSourceConfig(String sourceConfigId)
                                                                   throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getSourceConfigParams

public List<org.eurekaclinical.eureka.client.comm.SourceConfigParams> getSourceConfigParams()
                                                                                     throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

createDestination

public URI createDestination(org.eurekaclinical.eureka.client.comm.Destination destination)
                      throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

updateDestination

public void updateDestination(org.eurekaclinical.eureka.client.comm.Destination destination)
                       throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getDestinations

public List<org.eurekaclinical.eureka.client.comm.Destination> getDestinations()
                                                                        throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getCohortDestinations

public List<org.eurekaclinical.eureka.client.comm.CohortDestination> getCohortDestinations()
                                                                                    throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getI2B2Destinations

public List<org.eurekaclinical.eureka.client.comm.I2B2Destination> getI2B2Destinations()
                                                                                throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getDestination

public org.eurekaclinical.eureka.client.comm.Destination getDestination(String destinationId)
                                                                 throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

deleteDestination

public void deleteDestination(String destinationId)
                       throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getSystemPhenotypeSearchResults

public List<String> getSystemPhenotypeSearchResults(String searchKey)
                                             throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException

getSystemPhenotypeSearchResultsBySearchKey

public List<org.eurekaclinical.eureka.client.comm.SystemPhenotype> getSystemPhenotypeSearchResultsBySearchKey(String searchKey)
                                                                                                       throws org.eurekaclinical.common.comm.clients.ClientException

Throws:

org.eurekaclinical.common.comm.clients.ClientException