| Package | Description |
|---|---|
| org.protempa | |
| org.protempa.backend.ksb | |
| org.protempa.query |
| Modifier and Type | Interface and Description |
|---|---|
interface |
AbstractionDefinition
Interface to definitions of the constraints required to infer an abstract
parameter.
|
interface |
ParameterDefinition |
interface |
TemporalPropositionDefinition |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractAbstractionDefinition
Definition of the constraints required to infer an abstract parameter.
|
class |
AbstractPropositionDefinition
Abstract base class for all knowledge definition classes.
|
class |
CompoundLowLevelAbstractionDefinition
An abstraction for representing compound low-level abstractions.
|
class |
ConstantDefinition |
class |
ContextDefinition
A context is a state of affairs that, when interpreted over a time interval,
can change the interpretation of data or abstractions.
|
class |
EventDefinition
Defines external acts upon an entity such as a patient.
|
class |
HighLevelAbstractionDefinition
Definition of an extended parameter that's a high-level abstraction.
|
class |
LowLevelAbstractionDefinition
Definition of low-level abstraction.
|
class |
PrimitiveParameterDefinition
Defines measurable or observable time-stamped data types.
|
class |
SequentialTemporalPatternDefinition |
class |
SliceDefinition |
| Modifier and Type | Method and Description |
|---|---|
PropositionDefinition |
PropositionDefinitionCache.get(String id) |
PropositionDefinition |
KnowledgeSourceCache.get(String propId) |
PropositionDefinition |
KnowledgeSource.readPropositionDefinition(String id)
Returns the specified proposition definition.
|
PropositionDefinition |
KnowledgeSourceImpl.readPropositionDefinition(String id)
Returns the specified proposition definition.
|
| Modifier and Type | Method and Description |
|---|---|
void |
PropositionDefinitionVisitor.visit(Collection<? extends PropositionDefinition> propositionDefinitions)
Process a collection of proposition definitions.
|
void |
AbstractPropositionDefinitionVisitor.visit(Collection<? extends PropositionDefinition> propositionDefinitions)
Processes a collection of proposition definitions.
|
void |
AbstractPropositionDefinitionCheckedVisitor.visit(Collection<? extends PropositionDefinition> propositionDefinitions)
Processes a collection of proposition definitions.
|
void |
PropositionDefinitionCheckedVisitor.visit(Collection<? extends PropositionDefinition> propositionDefinitions)
Process a collection of proposition definitions.
|
| Constructor and Description |
|---|
PropositionDefinitionCache(Collection<? extends PropositionDefinition> propDefs) |
| Modifier and Type | Method and Description |
|---|---|
PropositionDefinition |
KnowledgeSourceBackend.readPropositionDefinition(String id)
Reads a proposition definition into the given PROTEMPA knowledge base.
|
PropositionDefinition |
SimpleKnowledgeSourceBackend.readPropositionDefinition(String id) |
| Modifier and Type | Method and Description |
|---|---|
Collection<PropositionDefinition> |
KnowledgeSourceBackend.collectPropDefDescendantsUsingAllNarrower(boolean inDataSourceOnly,
String[] propIds) |
Collection<PropositionDefinition> |
SimpleKnowledgeSourceBackend.collectPropDefDescendantsUsingAllNarrower(boolean inDataSourceOnly,
String[] propIds) |
Collection<PropositionDefinition> |
KnowledgeSourceBackend.collectPropDefDescendantsUsingInverseIsA(String[] propIds) |
Collection<PropositionDefinition> |
SimpleKnowledgeSourceBackend.collectPropDefDescendantsUsingInverseIsA(String[] propIds) |
List<PropositionDefinition> |
KnowledgeSourceBackend.readPropositionDefinitions(String[] ids) |
List<PropositionDefinition> |
SimpleKnowledgeSourceBackend.readPropositionDefinitions(String[] ids) |
| Constructor and Description |
|---|
SimpleKnowledgeSourceBackend(PropositionDefinition... propDefs) |
| Modifier and Type | Method and Description |
|---|---|
PropositionDefinition[] |
DefaultQueryBuilder.getPropositionDefinitions()
Returns an optional set of user-specified proposition definitions.
|
PropositionDefinition[] |
Query.getPropositionDefinitions()
Returns an optional set of user-specified proposition definitions.
|
| Modifier and Type | Method and Description |
|---|---|
void |
DefaultQueryBuilder.setPropositionDefinitions(PropositionDefinition[] propDefs)
Returns an optional set of user-specified proposition definitions.
|
| Constructor and Description |
|---|
Query(String[] keyIds,
Filter filters,
String[] propIds,
PropositionDefinition[] propDefs,
QueryMode queryMode)
Creates new Query instance with a default identifier.
|
Query(String id,
String[] keyIds,
Filter filters,
String[] propIds,
PropositionDefinition[] propDefs,
QueryMode queryMode)
Creates new Query instance.
|
Query(String id,
String username,
String[] keyIds,
Filter filters,
String[] propIds,
PropositionDefinition[] propDefs,
QueryMode queryMode) |
Query(String id,
String username,
String[] keyIds,
Filter filters,
String[] propIds,
PropositionDefinition[] propDefs,
QueryMode queryMode,
String databasePath) |
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