A B C D E F G H I J K L M N O P R S T U V _ 
All Classes All Packages

A

acceptedCategories(List<String>) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
accession(Set<UUID>) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
 
accession(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
accessionNumber(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
addAcceptedCategoriesItem(String) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
addAccessionItem(UUID) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
 
addBinsItem(Bin) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
addCategoriesItem(Category) - Method in class org.genesys.amphibian.client.model.ObservationChart
 
addContainsItem(String) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
addCookiesToRequest(MultiValueMap<String, String>, RequestEntity.BodyBuilder) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Add cookies to the request that is being built
addDataItem(Object) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
addDefaultCookie(String, String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Add a default cookie.
addDefaultHeader(String, String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Add a default header.
addDescriptorsItem(Descriptor) - Method in class org.genesys.amphibian.client.model.PreviewSheet
 
addDistinctValuesItem(Object) - Method in class org.genesys.amphibian.client.model.StatisticsData
 
addEqItem(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
addErrorsItem(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
addExamplesItem(Object) - Method in class org.genesys.amphibian.client.model.Descriptor
 
addHeadersToRequest(HttpHeaders, RequestEntity.BodyBuilder) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Add headers to the request that is being built
addMetadata(UUID, List<RowMetadata>) - Method in class org.genesys.amphibian.client.api.PreviewApi
Add metadata to ingested rows
addMetadataWithHttpInfo(UUID, List<RowMetadata>) - Method in class org.genesys.amphibian.client.api.PreviewApi
Add metadata to ingested rows
addObservations(String, ObservationRegistration) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Add observations, returns result of update Add accession observations
addObservationsWithHttpInfo(String, ObservationRegistration) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Add observations, returns result of update Add accession observations
addRowsItem(String) - Method in class org.genesys.amphibian.client.model.LongToWide
 
addSheetsItem(PreviewSheet) - Method in class org.genesys.amphibian.client.model.Preview
 
addSwItem(String) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
addValueMappingItem(ValueMapping) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
 
addValueMappingItem(ValueMapping) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
addValueMappingItem(ValueMapping) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
addValueMappingItem(ValueMapping) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
addVItem(Object) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
ApiClient - Class in org.genesys.amphibian.client.invoker
 
ApiClient() - Constructor for class org.genesys.amphibian.client.invoker.ApiClient
 
ApiClient(RestTemplate) - Constructor for class org.genesys.amphibian.client.invoker.ApiClient
 
ApiClient.CollectionFormat - Enum in org.genesys.amphibian.client.invoker
 
ApiErrorException - Class in org.genesys.amphibian.client.model
ApiErrorException
ApiErrorException() - Constructor for class org.genesys.amphibian.client.model.ApiErrorException
 
ApiKeyAuth - Class in org.genesys.amphibian.client.invoker.auth
 
ApiKeyAuth(String, String) - Constructor for class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
 
applyToParams(MultiValueMap<String, String>, HttpHeaders, MultiValueMap<String, String>) - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
 
applyToParams(MultiValueMap<String, String>, HttpHeaders, MultiValueMap<String, String>) - Method in interface org.genesys.amphibian.client.invoker.auth.Authentication
Apply authentication settings to header and / or query parameters.
applyToParams(MultiValueMap<String, String>, HttpHeaders, MultiValueMap<String, String>) - Method in class org.genesys.amphibian.client.invoker.auth.HttpBasicAuth
 
applyToParams(MultiValueMap<String, String>, HttpHeaders, MultiValueMap<String, String>) - Method in class org.genesys.amphibian.client.invoker.auth.HttpBearerAuth
 
arraySeparator(String) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
 
arraySeparator(String) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
arraySeparator(String) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
arraySeparator(String) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
Authentication - Interface in org.genesys.amphibian.client.invoker.auth
 

B

Bin - Class in org.genesys.amphibian.client.model
Bin
Bin() - Constructor for class org.genesys.amphibian.client.model.Bin
 
bins(List<Bin>) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
buildRestTemplate() - Method in class org.genesys.amphibian.client.invoker.ApiClient
Build the RestTemplate used to make HTTP requests.
BUSY - org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
 

C

c(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
categories(List<Category>) - Method in class org.genesys.amphibian.client.model.ObservationChart
 
categories(Map<String, List<Object>>) - Method in class org.genesys.amphibian.client.model.HeatMap
 
Category - Class in org.genesys.amphibian.client.model
Category
Category() - Constructor for class org.genesys.amphibian.client.model.Category
 
clone() - Method in class org.genesys.amphibian.client.invoker.RFC3339DateFormat
 
CODED - org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
 
collection(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
collectionPathParameterToString(ApiClient.CollectionFormat, Collection<?>) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Formats the specified collection path parameter to a string value.
column(String) - Method in class org.genesys.amphibian.client.model.LongToWide
 
columnName(String) - Method in class org.genesys.amphibian.client.model.Descriptor
 
columns(Map<String, Map<String, Object>>) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
columns(Map<String, Map<String, Object>>) - Method in class org.genesys.amphibian.client.model.DataSource
 
contains(Set<String>) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
contentLength(Long) - Method in class org.genesys.amphibian.client.model.Preview
 
contentType(String) - Method in class org.genesys.amphibian.client.model.IngestRequest
 
context(Object) - Method in class org.genesys.amphibian.client.model.ApiErrorException
 
count(Long) - Method in class org.genesys.amphibian.client.model.Category
 
createdDate(Date) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
createdDate(Date) - Method in class org.genesys.amphibian.client.model.Preview
 
createTable(DatasetTable) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Create a new table
createTableWithHttpInfo(DatasetTable) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Create a new table
CSV - org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
 

D

d(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
data(Boolean) - Method in class org.genesys.amphibian.client.model.DataSource
 
data(List<Object>) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
DatasetsApi - Class in org.genesys.amphibian.client.api
 
DatasetsApi() - Constructor for class org.genesys.amphibian.client.api.DatasetsApi
 
DatasetsApi(ApiClient) - Constructor for class org.genesys.amphibian.client.api.DatasetsApi
 
DatasetTable - Class in org.genesys.amphibian.client.model
Table definition
DatasetTable() - Constructor for class org.genesys.amphibian.client.model.DatasetTable
 
DatasetTableExtras - Class in org.genesys.amphibian.client.model
DatasetTableExtras
DatasetTableExtras() - Constructor for class org.genesys.amphibian.client.model.DatasetTableExtras
 
DatasetTableExtras.StateEnum - Enum in org.genesys.amphibian.client.model
Gets or Sets state
DataSource - Class in org.genesys.amphibian.client.model
DataSource
DataSource() - Constructor for class org.genesys.amphibian.client.model.DataSource
 
dataType(Descriptor.DataTypeEnum) - Method in class org.genesys.amphibian.client.model.Descriptor
 
DATE - org.genesys.amphibian.client.model.FieldFilter.TypeEnum
 
DECIMAL - org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
 
defaultValue - Variable in class org.genesys.amphibian.client.invoker.ServerVariable
 
deletePreview(UUID) - Method in class org.genesys.amphibian.client.api.PreviewApi
Remove the overview of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
deletePreviewWithHttpInfo(UUID) - Method in class org.genesys.amphibian.client.api.PreviewApi
Remove the overview of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
description - Variable in class org.genesys.amphibian.client.invoker.ServerConfiguration
 
description - Variable in class org.genesys.amphibian.client.invoker.ServerVariable
 
descriptor(UUID) - Method in class org.genesys.amphibian.client.model.ObservationChart
 
descriptor(UUID) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
descriptor(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
Descriptor - Class in org.genesys.amphibian.client.model
Descriptor
Descriptor() - Constructor for class org.genesys.amphibian.client.model.Descriptor
 
Descriptor.DataTypeEnum - Enum in org.genesys.amphibian.client.model
Gets or Sets dataType
descriptors(List<Descriptor>) - Method in class org.genesys.amphibian.client.model.PreviewSheet
 
descriptorSources(Map<String, Set<UUID>>) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
 
distinctValues(Set<Object>) - Method in class org.genesys.amphibian.client.model.StatisticsData
 
doi(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
DRAFT - org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
 
dropTable(DatasetTable) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Drop a table
dropTableWithHttpInfo(DatasetTable) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Drop a table

E

encoding(String) - Method in class org.genesys.amphibian.client.model.IngestRequest
 
enumValues - Variable in class org.genesys.amphibian.client.invoker.ServerVariable
 
eq(Set<Object>) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
equals(Object) - Method in class org.genesys.amphibian.client.model.ApiErrorException
 
equals(Object) - Method in class org.genesys.amphibian.client.model.Bin
 
equals(Object) - Method in class org.genesys.amphibian.client.model.Category
 
equals(Object) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
equals(Object) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
 
equals(Object) - Method in class org.genesys.amphibian.client.model.DataSource
 
equals(Object) - Method in class org.genesys.amphibian.client.model.Descriptor
 
equals(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
equals(Object) - Method in class org.genesys.amphibian.client.model.HeatMap
 
equals(Object) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
 
equals(Object) - Method in class org.genesys.amphibian.client.model.IngestRequest
 
equals(Object) - Method in class org.genesys.amphibian.client.model.LongToWide
 
equals(Object) - Method in class org.genesys.amphibian.client.model.ObservationChart
 
equals(Object) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
equals(Object) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
equals(Object) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
equals(Object) - Method in class org.genesys.amphibian.client.model.Preview
 
equals(Object) - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
 
equals(Object) - Method in class org.genesys.amphibian.client.model.PreviewSheet
 
equals(Object) - Method in class org.genesys.amphibian.client.model.RowMetadata
 
equals(Object) - Method in class org.genesys.amphibian.client.model.StatisticsData
 
equals(Object) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
 
equals(Object) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
equals(Object) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
equals(Object) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
equals(Object) - Method in class org.genesys.amphibian.client.model.ValueMapping
 
error(String) - Method in class org.genesys.amphibian.client.model.ApiErrorException
 
error(String) - Method in class org.genesys.amphibian.client.model.Preview
 
errors(List<String>) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
examples(Set<Object>) - Method in class org.genesys.amphibian.client.model.Descriptor
 
expandPath(String, Map<String, Object>) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Expand path template with variables
expires(Date) - Method in class org.genesys.amphibian.client.model.IngestRequest
 
expires(Date) - Method in class org.genesys.amphibian.client.model.Preview
 
extras(DatasetTableExtras) - Method in class org.genesys.amphibian.client.model.DatasetTable
 

F

f(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
FAILED - org.genesys.amphibian.client.model.Preview.StateEnum
 
field(String) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
 
field(String) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
field(String) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
field(String) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
FieldFilter - Class in org.genesys.amphibian.client.model
FieldFilter
FieldFilter() - Constructor for class org.genesys.amphibian.client.model.FieldFilter
 
FieldFilter.TypeEnum - Enum in org.genesys.amphibian.client.model
Gets or Sets type
fields(Map<String, FieldFilter>) - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
 
firstRow(Long) - Method in class org.genesys.amphibian.client.model.DataSource
 
format(Date, StringBuffer, FieldPosition) - Method in class org.genesys.amphibian.client.invoker.RFC3339DateFormat
 
formatDate(Date) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Format the given Date object into string.
from(Object) - Method in class org.genesys.amphibian.client.model.ValueMapping
 
fromValue(String) - Static method in enum org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
 
fromValue(String) - Static method in enum org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
 
fromValue(String) - Static method in enum org.genesys.amphibian.client.model.FieldFilter.TypeEnum
 
fromValue(String) - Static method in enum org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
 
fromValue(String) - Static method in enum org.genesys.amphibian.client.model.Preview.StateEnum
 

G

ge(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
generateDescriptors(UUID) - Method in class org.genesys.amphibian.client.api.PreviewApi
Generate descriptors for all PreviewSheets of given Preview
generateDescriptorsWithHttpInfo(UUID) - Method in class org.genesys.amphibian.client.api.PreviewApi
Generate descriptors for all PreviewSheets of given Preview
generateQueryUri(MultiValueMap<String, String>, Map<String, Object>) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Include queryParams in uriParams taking into account the paramName
genus(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
getAcceptedCategories() - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
Get acceptedCategories
getAccession() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get accession
getAccession() - Method in class org.genesys.amphibian.client.model.TraitDataFilter
Get accession
getAccessionDatasetObservations(List<String>, List<UUID>, Integer, Integer, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Get accession observations from datasets
getAccessionDatasetObservationsWithHttpInfo(List<String>, List<UUID>, Integer, Integer, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Get accession observations from datasets
getAccessionNumber() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get accessionNumber
getApiClient() - Method in class org.genesys.amphibian.client.api.DatasetsApi
 
getApiClient() - Method in class org.genesys.amphibian.client.api.InfoApi
 
getApiClient() - Method in class org.genesys.amphibian.client.api.PreviewApi
 
getApiKey() - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
 
getApiKeyPrefix() - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
 
getArraySeparator() - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
Get arraySeparator
getArraySeparator() - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
Get arraySeparator
getArraySeparator() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
Get arraySeparator
getArraySeparator() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
Get arraySeparator
getAuthentication(String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Get authentication for the given name.
getAuthentications() - Method in class org.genesys.amphibian.client.invoker.ApiClient
Get authentications (key: authentication name, value: authentication).
getBasePath() - Method in class org.genesys.amphibian.client.invoker.ApiClient
Get the current base path
getBearerToken() - Method in class org.genesys.amphibian.client.invoker.auth.HttpBearerAuth
 
getBins() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
Get bins
getC() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get c
getCategories() - Method in class org.genesys.amphibian.client.model.HeatMap
Get categories
getCategories() - Method in class org.genesys.amphibian.client.model.ObservationChart
Get categories
getCollection() - Method in class org.genesys.amphibian.client.model.DatasetTable
Get collection
getColumn() - Method in class org.genesys.amphibian.client.model.LongToWide
Get column
getColumnName() - Method in class org.genesys.amphibian.client.model.Descriptor
Get columnName
getColumns() - Method in class org.genesys.amphibian.client.model.DatasetTable
Get columns
getColumns() - Method in class org.genesys.amphibian.client.model.DataSource
Get columns
getContains() - Method in class org.genesys.amphibian.client.model.FieldFilter
Get contains
getContentLength() - Method in class org.genesys.amphibian.client.model.Preview
Get contentLength
getContentType() - Method in class org.genesys.amphibian.client.model.IngestRequest
Optionally provide file content type
getContext() - Method in class org.genesys.amphibian.client.model.ApiErrorException
Get context
getCount() - Method in class org.genesys.amphibian.client.model.Category
Get count
getCreatedDate() - Method in class org.genesys.amphibian.client.model.DatasetTable
Get createdDate
getCreatedDate() - Method in class org.genesys.amphibian.client.model.Preview
Get createdDate
getD() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get d
getData() - Method in class org.genesys.amphibian.client.model.DataSource
Get data
getData() - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
Get data
getData(UUID, Integer, Long, Integer, List<String>, PreviewDataFilter) - Method in class org.genesys.amphibian.client.api.PreviewApi
Get the overview of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
getDataset(String) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Get dataset information
getDatasets(List<String>) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Get list of datasets information
getDatasetsWithHttpInfo(List<String>) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Get list of datasets information
getDatasetWithHttpInfo(String) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Get dataset information
getDataType() - Method in class org.genesys.amphibian.client.model.Descriptor
Get dataType
getDataWithHttpInfo(UUID, Integer, Long, Integer, List<String>, PreviewDataFilter) - Method in class org.genesys.amphibian.client.api.PreviewApi
Get the overview of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
getDateFormat() - Method in class org.genesys.amphibian.client.invoker.ApiClient
Get the date format used to parse/format date parameters.
getDescriptor() - Method in class org.genesys.amphibian.client.model.ObservationChart
Get descriptor
getDescriptor() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
Get descriptor
getDescriptor() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get descriptor
getDescriptors() - Method in class org.genesys.amphibian.client.model.PreviewSheet
Get descriptors
getDescriptorSources() - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
Get descriptorSources
getDistinctValues() - Method in class org.genesys.amphibian.client.model.StatisticsData
Get distinctValues
getDoi() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get doi
getEncoding() - Method in class org.genesys.amphibian.client.model.IngestRequest
Optionally provide character encoding
getEq() - Method in class org.genesys.amphibian.client.model.FieldFilter
Get eq
getError() - Method in class org.genesys.amphibian.client.model.ApiErrorException
Get error
getError() - Method in class org.genesys.amphibian.client.model.Preview
Get error
getErrors() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get errors
getExamples() - Method in class org.genesys.amphibian.client.model.Descriptor
Get examples
getExpires() - Method in class org.genesys.amphibian.client.model.IngestRequest
Set the date after the ingested file may be removed from the database (defaults to default expiration period)
getExpires() - Method in class org.genesys.amphibian.client.model.Preview
Get expires
getExtras() - Method in class org.genesys.amphibian.client.model.DatasetTable
Get extras
getF() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get f
getField() - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
Get field
getField() - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
Get field
getField() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
Get field
getField() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
Get field
getFields() - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
Get fields
getFile() - Method in class org.genesys.amphibian.client.model.IngestRequest
The file to ingest into the database
getFirstRow() - Method in class org.genesys.amphibian.client.model.DataSource
Get firstRow
getFrom() - Method in class org.genesys.amphibian.client.model.ValueMapping
Get from
getGe() - Method in class org.genesys.amphibian.client.model.FieldFilter
Get ge
getGenus() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get genus
getGt() - Method in class org.genesys.amphibian.client.model.FieldFilter
Get gt
getHeatMap() - Method in class org.genesys.amphibian.client.model.HeatMap
Get heatMap
getHeatMapData(String, UUID, UUID, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Generate a heat map Calculate a heat map of observations for two selected categorical descriptors in DatasetTable
getHeatMapDataWithHttpInfo(String, UUID, UUID, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Generate a heat map Calculate a heat map of observations for two selected categorical descriptors in DatasetTable
getId() - Method in class org.genesys.amphibian.client.model.DatasetTable
Get id
getId() - Method in class org.genesys.amphibian.client.model.Preview
Get id
getIndex() - Method in class org.genesys.amphibian.client.model.PreviewSheet
Get index
getInstituteCode() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get instituteCode
getIntegerOnly() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
Get integerOnly
getIsAccessionMapped() - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
Get isAccessionMapped
getKey() - Method in class org.genesys.amphibian.client.model.DatasetTable
Get key
getLe() - Method in class org.genesys.amphibian.client.model.FieldFilter
Get le
getLocalizedError() - Method in class org.genesys.amphibian.client.model.ApiErrorException
Get localizedError
getLocation() - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
 
getLt() - Method in class org.genesys.amphibian.client.model.FieldFilter
Get lt
getMax() - Method in class org.genesys.amphibian.client.model.Bin
Get max
getMax() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
Get max
getMax() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
Get max
getMaxLength() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
Get maxLength
getMeta() - Method in class org.genesys.amphibian.client.model.RowMetadata
Get meta
getMin() - Method in class org.genesys.amphibian.client.model.Bin
Get min
getMin() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
Get min
getMin() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
Get min
getModifiedDate() - Method in class org.genesys.amphibian.client.model.DatasetTable
Get modifiedDate
getModifiedDate() - Method in class org.genesys.amphibian.client.model.Preview
Get modifiedDate
getName() - Method in class org.genesys.amphibian.client.model.Preview
Get name
getName() - Method in class org.genesys.amphibian.client.model.PreviewSheet
Get name
getNullValues() - Method in class org.genesys.amphibian.client.model.ObservationChart
Get nullValues
getNullValues() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
Get nullValues
getNumberOfDistinct() - Method in class org.genesys.amphibian.client.model.StatisticsData
Get numberOfDistinct
getNumberOfNull() - Method in class org.genesys.amphibian.client.model.Descriptor
Get numberOfNull
getNumberOfNull() - Method in class org.genesys.amphibian.client.model.StatisticsData
Get numberOfNull
getObservations() - Method in class org.genesys.amphibian.client.model.TraitDataFilter
Get observations
getObservations(String, List<UUID>, Integer, Integer, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Get accession observations from this dataset
getObservationsCharts(String, List<UUID>, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Generate charts Get charts of integer and coded observations from this dataset
getObservationsChartsWithHttpInfo(String, List<UUID>, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Generate charts Get charts of integer and coded observations from this dataset
getObservationsHistogram(String, List<UUID>, Integer, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Generate histograms Get histogram of numerical observations from this dataset
getObservationsHistogramWithHttpInfo(String, List<UUID>, Integer, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Generate histograms Get histogram of numerical observations from this dataset
getObservationsWithHttpInfo(String, List<UUID>, Integer, Integer, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Get accession observations from this dataset
getParamName() - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
 
getPassword() - Method in class org.genesys.amphibian.client.invoker.auth.HttpBasicAuth
 
getPreview(UUID) - Method in class org.genesys.amphibian.client.api.PreviewApi
Get the overview of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
getPreviewWithHttpInfo(UUID) - Method in class org.genesys.amphibian.client.api.PreviewApi
Get the overview of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
getR() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get r
getR() - Method in class org.genesys.amphibian.client.model.RowMetadata
Get r
getReferenceUuid() - Method in class org.genesys.amphibian.client.model.Preview
Get referenceUuid
getRegExp() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
Get regExp
getRowCount() - Method in class org.genesys.amphibian.client.model.PreviewSheet
Get rowCount
getRows() - Method in class org.genesys.amphibian.client.model.LongToWide
Get rows
getS() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get s
getS() - Method in class org.genesys.amphibian.client.model.RowMetadata
Get s
getSheet() - Method in class org.genesys.amphibian.client.model.LongToWide
Get sheet
getSheets() - Method in class org.genesys.amphibian.client.model.Preview
Get sheets
getSources() - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
Get sources
getStartRow() - Method in class org.genesys.amphibian.client.model.LongToWide
Get startRow
getState() - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
Get state
getState() - Method in class org.genesys.amphibian.client.model.Preview
Get state
getStatisticsData(UUID, Integer, List<String>, Long, Integer) - Method in class org.genesys.amphibian.client.api.PreviewApi
Get the statistics of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
getStatisticsDataWithHttpInfo(UUID, Integer, List<String>, Long, Integer) - Method in class org.genesys.amphibian.client.api.PreviewApi
Get the statistics of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
getStreamUuid() - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
Get streamUuid
getSw() - Method in class org.genesys.amphibian.client.model.FieldFilter
Get sw
getTargetType() - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
Get targetType
getTitle() - Method in class org.genesys.amphibian.client.model.DatasetTable
Get title
getTo() - Method in class org.genesys.amphibian.client.model.ValueMapping
Get to
getTotalElements() - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
Get totalElements
getTotalValues() - Method in class org.genesys.amphibian.client.model.StatisticsData
Get totalValues
getType() - Method in class org.genesys.amphibian.client.model.FieldFilter
Get type
getUnique() - Method in class org.genesys.amphibian.client.model.Descriptor
Get unique
getUsername() - Method in class org.genesys.amphibian.client.invoker.auth.HttpBasicAuth
 
getV() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
Get v
getValue() - Method in class org.genesys.amphibian.client.model.Bin
Get value
getValue() - Method in class org.genesys.amphibian.client.model.Category
Get value
getValue() - Method in enum org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
 
getValue() - Method in enum org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
 
getValue() - Method in enum org.genesys.amphibian.client.model.FieldFilter.TypeEnum
 
getValue() - Method in enum org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
 
getValue() - Method in class org.genesys.amphibian.client.model.LongToWide
Get value
getValue() - Method in enum org.genesys.amphibian.client.model.Preview.StateEnum
 
getValueMapping() - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
Get valueMapping
getValueMapping() - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
Get valueMapping
getValueMapping() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
Get valueMapping
getValueMapping() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
Get valueMapping
getVersion() - Method in class org.genesys.amphibian.client.api.InfoApi
Get Amphibian version
getVersion() - Method in class org.genesys.amphibian.client.model.DatasetTable
Get version
getVersion() - Method in class org.genesys.amphibian.client.model.Preview
Get version
getVersionWithHttpInfo() - Method in class org.genesys.amphibian.client.api.InfoApi
Get Amphibian version
gt(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
 

H

hashCode() - Method in class org.genesys.amphibian.client.model.ApiErrorException
 
hashCode() - Method in class org.genesys.amphibian.client.model.Bin
 
hashCode() - Method in class org.genesys.amphibian.client.model.Category
 
hashCode() - Method in class org.genesys.amphibian.client.model.DatasetTable
 
hashCode() - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
 
hashCode() - Method in class org.genesys.amphibian.client.model.DataSource
 
hashCode() - Method in class org.genesys.amphibian.client.model.Descriptor
 
hashCode() - Method in class org.genesys.amphibian.client.model.FieldFilter
 
hashCode() - Method in class org.genesys.amphibian.client.model.HeatMap
 
hashCode() - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
 
hashCode() - Method in class org.genesys.amphibian.client.model.IngestRequest
 
hashCode() - Method in class org.genesys.amphibian.client.model.LongToWide
 
hashCode() - Method in class org.genesys.amphibian.client.model.ObservationChart
 
hashCode() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
hashCode() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
hashCode() - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
hashCode() - Method in class org.genesys.amphibian.client.model.Preview
 
hashCode() - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
 
hashCode() - Method in class org.genesys.amphibian.client.model.PreviewSheet
 
hashCode() - Method in class org.genesys.amphibian.client.model.RowMetadata
 
hashCode() - Method in class org.genesys.amphibian.client.model.StatisticsData
 
hashCode() - Method in class org.genesys.amphibian.client.model.TraitDataFilter
 
hashCode() - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
hashCode() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
hashCode() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
hashCode() - Method in class org.genesys.amphibian.client.model.ValueMapping
 
heatMap(Map<String, Map<String, Integer>>) - Method in class org.genesys.amphibian.client.model.HeatMap
 
HeatMap - Class in org.genesys.amphibian.client.model
HeatMap
HeatMap() - Constructor for class org.genesys.amphibian.client.model.HeatMap
 
HttpBasicAuth - Class in org.genesys.amphibian.client.invoker.auth
 
HttpBasicAuth() - Constructor for class org.genesys.amphibian.client.invoker.auth.HttpBasicAuth
 
HttpBearerAuth - Class in org.genesys.amphibian.client.invoker.auth
 
HttpBearerAuth(String) - Constructor for class org.genesys.amphibian.client.invoker.auth.HttpBearerAuth
 

I

id(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
id(String) - Method in class org.genesys.amphibian.client.model.Preview
 
index(Integer) - Method in class org.genesys.amphibian.client.model.PreviewSheet
 
InfoApi - Class in org.genesys.amphibian.client.api
 
InfoApi() - Constructor for class org.genesys.amphibian.client.api.InfoApi
 
InfoApi(ApiClient) - Constructor for class org.genesys.amphibian.client.api.InfoApi
 
ingest(UUID, Date, String, String, File) - Method in class org.genesys.amphibian.client.api.PreviewApi
Ingest a new dataset Ingests Excel, CSV or TSV files for preview
IngestColumnRequest - Class in org.genesys.amphibian.client.model
IngestColumnRequest
IngestColumnRequest() - Constructor for class org.genesys.amphibian.client.model.IngestColumnRequest
 
IngestColumnRequest.TargetTypeEnum - Enum in org.genesys.amphibian.client.model
Gets or Sets targetType
ingestFromPreview(String, UUID, UUID, Integer, Long, IngestColumnRequest) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Ingest column values from Preview to Table
ingestFromPreviewWithHttpInfo(String, UUID, UUID, Integer, Long, IngestColumnRequest) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Ingest column values from Preview to Table
IngestRequest - Class in org.genesys.amphibian.client.model
IngestRequest
IngestRequest() - Constructor for class org.genesys.amphibian.client.model.IngestRequest
 
ingestWithHttpInfo(UUID, Date, String, String, File) - Method in class org.genesys.amphibian.client.api.PreviewApi
Ingest a new dataset Ingests Excel, CSV or TSV files for preview
init() - Method in class org.genesys.amphibian.client.invoker.ApiClient
 
instituteCode(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
INTEGER - org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
 
integerOnly(Boolean) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
invokeAPI(String, HttpMethod, Map<String, Object>, MultiValueMap<String, String>, Object, HttpHeaders, MultiValueMap<String, String>, MultiValueMap<String, Object>, List<MediaType>, MediaType, String[], ParameterizedTypeReference<T>) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Invoke API by sending HTTP request with the given options.
isAccessionMapped(Boolean) - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
 
isDebugging() - Method in class org.genesys.amphibian.client.invoker.ApiClient
Check that whether debugging is enabled for this API client.
isJsonMime(String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Check if the given String is a JSON MIME.
isJsonMime(MediaType) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Check if the given MIME is a JSON MIME.
isProblemJsonMime(String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Check if the given String is a Problem JSON MIME (RFC-7807).

J

JSON_PROPERTY_ACCEPTED_CATEGORIES - Static variable in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
JSON_PROPERTY_ACCESSION - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_ACCESSION - Static variable in class org.genesys.amphibian.client.model.TraitDataFilter
 
JSON_PROPERTY_ACCESSION_NUMBER - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_ARRAY_SEPARATOR - Static variable in class org.genesys.amphibian.client.model.IngestColumnRequest
 
JSON_PROPERTY_ARRAY_SEPARATOR - Static variable in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
JSON_PROPERTY_ARRAY_SEPARATOR - Static variable in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
JSON_PROPERTY_ARRAY_SEPARATOR - Static variable in class org.genesys.amphibian.client.model.ValidateTextRequest
 
JSON_PROPERTY_BINS - Static variable in class org.genesys.amphibian.client.model.ObservationHistogram
 
JSON_PROPERTY_C - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_CATEGORIES - Static variable in class org.genesys.amphibian.client.model.HeatMap
 
JSON_PROPERTY_CATEGORIES - Static variable in class org.genesys.amphibian.client.model.ObservationChart
 
JSON_PROPERTY_COLLECTION - Static variable in class org.genesys.amphibian.client.model.DatasetTable
 
JSON_PROPERTY_COLUMN - Static variable in class org.genesys.amphibian.client.model.LongToWide
 
JSON_PROPERTY_COLUMN_NAME - Static variable in class org.genesys.amphibian.client.model.Descriptor
 
JSON_PROPERTY_COLUMNS - Static variable in class org.genesys.amphibian.client.model.DatasetTable
 
JSON_PROPERTY_COLUMNS - Static variable in class org.genesys.amphibian.client.model.DataSource
 
JSON_PROPERTY_CONTAINS - Static variable in class org.genesys.amphibian.client.model.FieldFilter
 
JSON_PROPERTY_CONTENT_LENGTH - Static variable in class org.genesys.amphibian.client.model.Preview
 
JSON_PROPERTY_CONTENT_TYPE - Static variable in class org.genesys.amphibian.client.model.IngestRequest
 
JSON_PROPERTY_CONTEXT - Static variable in class org.genesys.amphibian.client.model.ApiErrorException
 
JSON_PROPERTY_COUNT - Static variable in class org.genesys.amphibian.client.model.Category
 
JSON_PROPERTY_CREATED_DATE - Static variable in class org.genesys.amphibian.client.model.DatasetTable
 
JSON_PROPERTY_CREATED_DATE - Static variable in class org.genesys.amphibian.client.model.Preview
 
JSON_PROPERTY_D - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_DATA - Static variable in class org.genesys.amphibian.client.model.DataSource
 
JSON_PROPERTY_DATA - Static variable in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
JSON_PROPERTY_DATA_TYPE - Static variable in class org.genesys.amphibian.client.model.Descriptor
 
JSON_PROPERTY_DESCRIPTOR - Static variable in class org.genesys.amphibian.client.model.ObservationChart
 
JSON_PROPERTY_DESCRIPTOR - Static variable in class org.genesys.amphibian.client.model.ObservationHistogram
 
JSON_PROPERTY_DESCRIPTOR - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_DESCRIPTOR_SOURCES - Static variable in class org.genesys.amphibian.client.model.DatasetTableExtras
 
JSON_PROPERTY_DESCRIPTORS - Static variable in class org.genesys.amphibian.client.model.PreviewSheet
 
JSON_PROPERTY_DISTINCT_VALUES - Static variable in class org.genesys.amphibian.client.model.StatisticsData
 
JSON_PROPERTY_DOI - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_ENCODING - Static variable in class org.genesys.amphibian.client.model.IngestRequest
 
JSON_PROPERTY_EQ - Static variable in class org.genesys.amphibian.client.model.FieldFilter
 
JSON_PROPERTY_ERROR - Static variable in class org.genesys.amphibian.client.model.ApiErrorException
 
JSON_PROPERTY_ERROR - Static variable in class org.genesys.amphibian.client.model.Preview
 
JSON_PROPERTY_ERRORS - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_EXAMPLES - Static variable in class org.genesys.amphibian.client.model.Descriptor
 
JSON_PROPERTY_EXPIRES - Static variable in class org.genesys.amphibian.client.model.IngestRequest
 
JSON_PROPERTY_EXPIRES - Static variable in class org.genesys.amphibian.client.model.Preview
 
JSON_PROPERTY_EXTRAS - Static variable in class org.genesys.amphibian.client.model.DatasetTable
 
JSON_PROPERTY_F - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_FIELD - Static variable in class org.genesys.amphibian.client.model.IngestColumnRequest
 
JSON_PROPERTY_FIELD - Static variable in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
JSON_PROPERTY_FIELD - Static variable in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
JSON_PROPERTY_FIELD - Static variable in class org.genesys.amphibian.client.model.ValidateTextRequest
 
JSON_PROPERTY_FIELDS - Static variable in class org.genesys.amphibian.client.model.PreviewDataFilter
 
JSON_PROPERTY_FILE - Static variable in class org.genesys.amphibian.client.model.IngestRequest
 
JSON_PROPERTY_FIRST_ROW - Static variable in class org.genesys.amphibian.client.model.DataSource
 
JSON_PROPERTY_FROM - Static variable in class org.genesys.amphibian.client.model.ValueMapping
 
JSON_PROPERTY_GE - Static variable in class org.genesys.amphibian.client.model.FieldFilter
 
JSON_PROPERTY_GENUS - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_GT - Static variable in class org.genesys.amphibian.client.model.FieldFilter
 
JSON_PROPERTY_HEAT_MAP - Static variable in class org.genesys.amphibian.client.model.HeatMap
 
JSON_PROPERTY_ID - Static variable in class org.genesys.amphibian.client.model.DatasetTable
 
JSON_PROPERTY_ID - Static variable in class org.genesys.amphibian.client.model.Preview
 
JSON_PROPERTY_INDEX - Static variable in class org.genesys.amphibian.client.model.PreviewSheet
 
JSON_PROPERTY_INSTITUTE_CODE - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_INTEGER_ONLY - Static variable in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
JSON_PROPERTY_IS_ACCESSION_MAPPED - Static variable in class org.genesys.amphibian.client.model.PreviewDataFilter
 
JSON_PROPERTY_KEY - Static variable in class org.genesys.amphibian.client.model.DatasetTable
 
JSON_PROPERTY_LE - Static variable in class org.genesys.amphibian.client.model.FieldFilter
 
JSON_PROPERTY_LOCALIZED_ERROR - Static variable in class org.genesys.amphibian.client.model.ApiErrorException
 
JSON_PROPERTY_LT - Static variable in class org.genesys.amphibian.client.model.FieldFilter
 
JSON_PROPERTY_MAX - Static variable in class org.genesys.amphibian.client.model.Bin
 
JSON_PROPERTY_MAX - Static variable in class org.genesys.amphibian.client.model.ObservationHistogram
 
JSON_PROPERTY_MAX - Static variable in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
JSON_PROPERTY_MAX_LENGTH - Static variable in class org.genesys.amphibian.client.model.ValidateTextRequest
 
JSON_PROPERTY_META - Static variable in class org.genesys.amphibian.client.model.RowMetadata
 
JSON_PROPERTY_MIN - Static variable in class org.genesys.amphibian.client.model.Bin
 
JSON_PROPERTY_MIN - Static variable in class org.genesys.amphibian.client.model.ObservationHistogram
 
JSON_PROPERTY_MIN - Static variable in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
JSON_PROPERTY_MODIFIED_DATE - Static variable in class org.genesys.amphibian.client.model.DatasetTable
 
JSON_PROPERTY_MODIFIED_DATE - Static variable in class org.genesys.amphibian.client.model.Preview
 
JSON_PROPERTY_NAME - Static variable in class org.genesys.amphibian.client.model.Preview
 
JSON_PROPERTY_NAME - Static variable in class org.genesys.amphibian.client.model.PreviewSheet
 
JSON_PROPERTY_NULL_VALUES - Static variable in class org.genesys.amphibian.client.model.ObservationChart
 
JSON_PROPERTY_NULL_VALUES - Static variable in class org.genesys.amphibian.client.model.ObservationHistogram
 
JSON_PROPERTY_NUMBER_OF_DISTINCT - Static variable in class org.genesys.amphibian.client.model.StatisticsData
 
JSON_PROPERTY_NUMBER_OF_NULL - Static variable in class org.genesys.amphibian.client.model.Descriptor
 
JSON_PROPERTY_NUMBER_OF_NULL - Static variable in class org.genesys.amphibian.client.model.StatisticsData
 
JSON_PROPERTY_OBSERVATIONS - Static variable in class org.genesys.amphibian.client.model.TraitDataFilter
 
JSON_PROPERTY_R - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_R - Static variable in class org.genesys.amphibian.client.model.RowMetadata
 
JSON_PROPERTY_REFERENCE_UUID - Static variable in class org.genesys.amphibian.client.model.Preview
 
JSON_PROPERTY_REG_EXP - Static variable in class org.genesys.amphibian.client.model.ValidateTextRequest
 
JSON_PROPERTY_ROW_COUNT - Static variable in class org.genesys.amphibian.client.model.PreviewSheet
 
JSON_PROPERTY_ROWS - Static variable in class org.genesys.amphibian.client.model.LongToWide
 
JSON_PROPERTY_S - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_S - Static variable in class org.genesys.amphibian.client.model.RowMetadata
 
JSON_PROPERTY_SHEET - Static variable in class org.genesys.amphibian.client.model.LongToWide
 
JSON_PROPERTY_SHEETS - Static variable in class org.genesys.amphibian.client.model.Preview
 
JSON_PROPERTY_SOURCES - Static variable in class org.genesys.amphibian.client.model.DatasetTableExtras
 
JSON_PROPERTY_START_ROW - Static variable in class org.genesys.amphibian.client.model.LongToWide
 
JSON_PROPERTY_STATE - Static variable in class org.genesys.amphibian.client.model.DatasetTableExtras
 
JSON_PROPERTY_STATE - Static variable in class org.genesys.amphibian.client.model.Preview
 
JSON_PROPERTY_STREAM_UUID - Static variable in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
JSON_PROPERTY_SW - Static variable in class org.genesys.amphibian.client.model.FieldFilter
 
JSON_PROPERTY_TARGET_TYPE - Static variable in class org.genesys.amphibian.client.model.IngestColumnRequest
 
JSON_PROPERTY_TITLE - Static variable in class org.genesys.amphibian.client.model.DatasetTable
 
JSON_PROPERTY_TO - Static variable in class org.genesys.amphibian.client.model.ValueMapping
 
JSON_PROPERTY_TOTAL_ELEMENTS - Static variable in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
JSON_PROPERTY_TOTAL_VALUES - Static variable in class org.genesys.amphibian.client.model.StatisticsData
 
JSON_PROPERTY_TYPE - Static variable in class org.genesys.amphibian.client.model.FieldFilter
 
JSON_PROPERTY_UNIQUE - Static variable in class org.genesys.amphibian.client.model.Descriptor
 
JSON_PROPERTY_V - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
 
JSON_PROPERTY_VALUE - Static variable in class org.genesys.amphibian.client.model.Bin
 
JSON_PROPERTY_VALUE - Static variable in class org.genesys.amphibian.client.model.Category
 
JSON_PROPERTY_VALUE - Static variable in class org.genesys.amphibian.client.model.LongToWide
 
JSON_PROPERTY_VALUE_MAPPING - Static variable in class org.genesys.amphibian.client.model.IngestColumnRequest
 
JSON_PROPERTY_VALUE_MAPPING - Static variable in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
JSON_PROPERTY_VALUE_MAPPING - Static variable in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
JSON_PROPERTY_VALUE_MAPPING - Static variable in class org.genesys.amphibian.client.model.ValidateTextRequest
 
JSON_PROPERTY_VERSION - Static variable in class org.genesys.amphibian.client.model.DatasetTable
 
JSON_PROPERTY_VERSION - Static variable in class org.genesys.amphibian.client.model.Preview
 

K

key(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
 

L

le(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
localizedError(String) - Method in class org.genesys.amphibian.client.model.ApiErrorException
 
longToWide(UUID, LongToWide) - Method in class org.genesys.amphibian.client.api.PreviewApi
Generate a sheet with wide data from long data
LongToWide - Class in org.genesys.amphibian.client.model
LongToWide
LongToWide() - Constructor for class org.genesys.amphibian.client.model.LongToWide
 
longToWideWithHttpInfo(UUID, LongToWide) - Method in class org.genesys.amphibian.client.api.PreviewApi
Generate a sheet with wide data from long data
lt(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
 

M

max(Double) - Method in class org.genesys.amphibian.client.model.Bin
 
max(Double) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
max(Double) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
maxLength(Integer) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
meta(Map<String, Object>) - Method in class org.genesys.amphibian.client.model.RowMetadata
 
min(Double) - Method in class org.genesys.amphibian.client.model.Bin
 
min(Double) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
min(Double) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
modifiedDate(Date) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
modifiedDate(Date) - Method in class org.genesys.amphibian.client.model.Preview
 
MULTI - org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
 

N

name(String) - Method in class org.genesys.amphibian.client.model.Preview
 
name(String) - Method in class org.genesys.amphibian.client.model.PreviewSheet
 
nullValues(Long) - Method in class org.genesys.amphibian.client.model.ObservationChart
 
nullValues(Long) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
NUMBER - org.genesys.amphibian.client.model.FieldFilter.TypeEnum
 
numberOfDistinct(Integer) - Method in class org.genesys.amphibian.client.model.StatisticsData
 
numberOfNull(Long) - Method in class org.genesys.amphibian.client.model.Descriptor
 
numberOfNull(Long) - Method in class org.genesys.amphibian.client.model.StatisticsData
 
NUMERIC - org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
 

O

ObservationChart - Class in org.genesys.amphibian.client.model
ObservationChart
ObservationChart() - Constructor for class org.genesys.amphibian.client.model.ObservationChart
 
ObservationHistogram - Class in org.genesys.amphibian.client.model
ObservationHistogram
ObservationHistogram() - Constructor for class org.genesys.amphibian.client.model.ObservationHistogram
 
ObservationRegistration - Class in org.genesys.amphibian.client.model
New accession observations
ObservationRegistration() - Constructor for class org.genesys.amphibian.client.model.ObservationRegistration
 
observations(Map<String, FieldFilter>) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
 
ObservationStreamResponse - Class in org.genesys.amphibian.client.model
ObservationStreamResponse
ObservationStreamResponse() - Constructor for class org.genesys.amphibian.client.model.ObservationStreamResponse
 
org.genesys.amphibian.client.api - package org.genesys.amphibian.client.api
 
org.genesys.amphibian.client.invoker - package org.genesys.amphibian.client.invoker
 
org.genesys.amphibian.client.invoker.auth - package org.genesys.amphibian.client.invoker.auth
 
org.genesys.amphibian.client.model - package org.genesys.amphibian.client.model
 

P

parameterToMultiValueMap(ApiClient.CollectionFormat, String, Object) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Converts a parameter to a MultiValueMap for use in REST requests
parameterToString(Object) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Format the given parameter object into string.
parse(String) - Method in class org.genesys.amphibian.client.invoker.RFC3339DateFormat
 
parse(String, ParsePosition) - Method in class org.genesys.amphibian.client.invoker.RFC3339DateFormat
 
parseDate(String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Parse the given string into Date object.
PIPES - org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
 
Preview - Class in org.genesys.amphibian.client.model
Preview
Preview() - Constructor for class org.genesys.amphibian.client.model.Preview
 
Preview.StateEnum - Enum in org.genesys.amphibian.client.model
Gets or Sets state
PreviewApi - Class in org.genesys.amphibian.client.api
 
PreviewApi() - Constructor for class org.genesys.amphibian.client.api.PreviewApi
 
PreviewApi(ApiClient) - Constructor for class org.genesys.amphibian.client.api.PreviewApi
 
PreviewDataFilter - Class in org.genesys.amphibian.client.model
Data filters
PreviewDataFilter() - Constructor for class org.genesys.amphibian.client.model.PreviewDataFilter
 
PreviewSheet - Class in org.genesys.amphibian.client.model
PreviewSheet
PreviewSheet() - Constructor for class org.genesys.amphibian.client.model.PreviewSheet
 
putCategoriesItem(String, List<Object>) - Method in class org.genesys.amphibian.client.model.HeatMap
 
putColumnsItem(String, Map<String, Object>) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
putColumnsItem(String, Map<String, Object>) - Method in class org.genesys.amphibian.client.model.DataSource
 
putDescriptorSourcesItem(String, Set<UUID>) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
 
putFieldsItem(String, FieldFilter) - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
 
putHeatMapItem(String, Map<String, Integer>) - Method in class org.genesys.amphibian.client.model.HeatMap
 
putMetaItem(String, Object) - Method in class org.genesys.amphibian.client.model.RowMetadata
 
putObservationsItem(String, FieldFilter) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
 
putSourcesItem(String, Map<String, DataSource>) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
 

R

r(Integer) - Method in class org.genesys.amphibian.client.model.RowMetadata
 
r(Long) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
READING - org.genesys.amphibian.client.model.Preview.StateEnum
 
READY - org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
 
READY - org.genesys.amphibian.client.model.Preview.StateEnum
 
referenceUuid(UUID) - Method in class org.genesys.amphibian.client.model.Preview
 
regExp(String) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
removeDescriptorData(String, UUID) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Remove descriptor data from table
removeDescriptorDataWithHttpInfo(String, UUID) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Remove descriptor data from table
ResponsePage<T> - Class in org.genesys.amphibian.client.model
 
ResponsePage(List<T>, int, int, Long, JsonNode, boolean, int, JsonNode, boolean, int) - Constructor for class org.genesys.amphibian.client.model.ResponsePage
 
RFC3339DateFormat - Class in org.genesys.amphibian.client.invoker
 
RFC3339DateFormat() - Constructor for class org.genesys.amphibian.client.invoker.RFC3339DateFormat
 
rowCount(Integer) - Method in class org.genesys.amphibian.client.model.PreviewSheet
 
RowMetadata - Class in org.genesys.amphibian.client.model
RowMetadata
RowMetadata() - Constructor for class org.genesys.amphibian.client.model.RowMetadata
 
rows(List<String>) - Method in class org.genesys.amphibian.client.model.LongToWide
 

S

s(Integer) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
s(Integer) - Method in class org.genesys.amphibian.client.model.RowMetadata
 
selectBody(Object, MultiValueMap<String, Object>, MediaType) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Select the body to use for the request
selectHeaderAccept(String[]) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Select the Accept header's value from the given accepts array: if JSON exists in the given array, use it; otherwise use all of them (joining into a string)
selectHeaderContentType(String[]) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Select the Content-Type header's value from the given array: if JSON exists in the given array, use it; otherwise use the first one of the array.
ServerConfiguration - Class in org.genesys.amphibian.client.invoker
Representing a Server configuration.
ServerConfiguration(String, String, Map<String, ServerVariable>) - Constructor for class org.genesys.amphibian.client.invoker.ServerConfiguration
 
ServerVariable - Class in org.genesys.amphibian.client.invoker
Representing a Server Variable for server URL template substitution.
ServerVariable(String, String, HashSet<String>) - Constructor for class org.genesys.amphibian.client.invoker.ServerVariable
 
setAcceptedCategories(List<String>) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
setAccession(Set<UUID>) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
 
setAccession(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setAccessionNumber(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setApiClient(ApiClient) - Method in class org.genesys.amphibian.client.api.DatasetsApi
 
setApiClient(ApiClient) - Method in class org.genesys.amphibian.client.api.InfoApi
 
setApiClient(ApiClient) - Method in class org.genesys.amphibian.client.api.PreviewApi
 
setApiKey(String) - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
 
setApiKeyPrefix(String) - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
 
setArraySeparator(String) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
 
setArraySeparator(String) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
setArraySeparator(String) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
setArraySeparator(String) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
setBasePath(String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Set the base path, which should include the host
setBearerToken(String) - Method in class org.genesys.amphibian.client.invoker.auth.HttpBearerAuth
 
setBins(List<Bin>) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
setC(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setCategories(List<Category>) - Method in class org.genesys.amphibian.client.model.ObservationChart
 
setCategories(Map<String, List<Object>>) - Method in class org.genesys.amphibian.client.model.HeatMap
 
setCollection(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
setColumn(String) - Method in class org.genesys.amphibian.client.model.LongToWide
 
setColumnName(String) - Method in class org.genesys.amphibian.client.model.Descriptor
 
setColumns(Map<String, Map<String, Object>>) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
setColumns(Map<String, Map<String, Object>>) - Method in class org.genesys.amphibian.client.model.DataSource
 
setContains(Set<String>) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
setContentLength(Long) - Method in class org.genesys.amphibian.client.model.Preview
 
setContentType(String) - Method in class org.genesys.amphibian.client.model.IngestRequest
 
setContext(Object) - Method in class org.genesys.amphibian.client.model.ApiErrorException
 
setCount(Long) - Method in class org.genesys.amphibian.client.model.Category
 
setCreatedDate(Date) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
setCreatedDate(Date) - Method in class org.genesys.amphibian.client.model.Preview
 
setD(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setData(Boolean) - Method in class org.genesys.amphibian.client.model.DataSource
 
setData(List<Object>) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
setDataType(Descriptor.DataTypeEnum) - Method in class org.genesys.amphibian.client.model.Descriptor
 
setDateFormat(DateFormat) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Set the date format used to parse/format date parameters.
setDebugging(boolean) - Method in class org.genesys.amphibian.client.invoker.ApiClient
 
setDescriptor(UUID) - Method in class org.genesys.amphibian.client.model.ObservationChart
 
setDescriptor(UUID) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
setDescriptor(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setDescriptors(List<Descriptor>) - Method in class org.genesys.amphibian.client.model.PreviewSheet
 
setDescriptorSources(Map<String, Set<UUID>>) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
 
setDistinctValues(Set<Object>) - Method in class org.genesys.amphibian.client.model.StatisticsData
 
setDoi(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setEncoding(String) - Method in class org.genesys.amphibian.client.model.IngestRequest
 
setEq(Set<Object>) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
setError(String) - Method in class org.genesys.amphibian.client.model.ApiErrorException
 
setError(String) - Method in class org.genesys.amphibian.client.model.Preview
 
setErrors(List<String>) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setExamples(Set<Object>) - Method in class org.genesys.amphibian.client.model.Descriptor
 
setExpires(Date) - Method in class org.genesys.amphibian.client.model.IngestRequest
 
setExpires(Date) - Method in class org.genesys.amphibian.client.model.Preview
 
setExtras(DatasetTableExtras) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
setF(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setField(String) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
 
setField(String) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
setField(String) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
setField(String) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
setFields(Map<String, FieldFilter>) - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
 
setFile(File) - Method in class org.genesys.amphibian.client.model.IngestRequest
 
setFirstRow(Long) - Method in class org.genesys.amphibian.client.model.DataSource
 
setFrom(Object) - Method in class org.genesys.amphibian.client.model.ValueMapping
 
setGe(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
setGenus(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setGt(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
setHeatMap(Map<String, Map<String, Integer>>) - Method in class org.genesys.amphibian.client.model.HeatMap
 
setId(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
setId(String) - Method in class org.genesys.amphibian.client.model.Preview
 
setIndex(Integer) - Method in class org.genesys.amphibian.client.model.PreviewSheet
 
setInstituteCode(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setIntegerOnly(Boolean) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
setIsAccessionMapped(Boolean) - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
 
setKey(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
setLe(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
setLocalizedError(String) - Method in class org.genesys.amphibian.client.model.ApiErrorException
 
setLt(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
setMax(Double) - Method in class org.genesys.amphibian.client.model.Bin
 
setMax(Double) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
setMax(Double) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
setMaxLength(Integer) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
setMeta(Map<String, Object>) - Method in class org.genesys.amphibian.client.model.RowMetadata
 
setMin(Double) - Method in class org.genesys.amphibian.client.model.Bin
 
setMin(Double) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
setMin(Double) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
setModifiedDate(Date) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
setModifiedDate(Date) - Method in class org.genesys.amphibian.client.model.Preview
 
setName(String) - Method in class org.genesys.amphibian.client.model.Preview
 
setName(String) - Method in class org.genesys.amphibian.client.model.PreviewSheet
 
setNullValues(Long) - Method in class org.genesys.amphibian.client.model.ObservationChart
 
setNullValues(Long) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
setNumberOfDistinct(Integer) - Method in class org.genesys.amphibian.client.model.StatisticsData
 
setNumberOfNull(Long) - Method in class org.genesys.amphibian.client.model.Descriptor
 
setNumberOfNull(Long) - Method in class org.genesys.amphibian.client.model.StatisticsData
 
setObservations(Map<String, FieldFilter>) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
 
setPassword(String) - Method in class org.genesys.amphibian.client.invoker.auth.HttpBasicAuth
 
setR(Integer) - Method in class org.genesys.amphibian.client.model.RowMetadata
 
setR(Long) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setReferenceUuid(UUID) - Method in class org.genesys.amphibian.client.model.Preview
 
setRegExp(String) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
setRowCount(Integer) - Method in class org.genesys.amphibian.client.model.PreviewSheet
 
setRows(List<String>) - Method in class org.genesys.amphibian.client.model.LongToWide
 
setS(Integer) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setS(Integer) - Method in class org.genesys.amphibian.client.model.RowMetadata
 
setSheet(Integer) - Method in class org.genesys.amphibian.client.model.LongToWide
 
setSheets(List<PreviewSheet>) - Method in class org.genesys.amphibian.client.model.Preview
 
setSources(Map<String, Map<String, DataSource>>) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
 
setStartRow(Integer) - Method in class org.genesys.amphibian.client.model.LongToWide
 
setState(DatasetTableExtras.StateEnum) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
 
setState(Preview.StateEnum) - Method in class org.genesys.amphibian.client.model.Preview
 
setStreamUuid(UUID) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
setSw(Set<String>) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
setTargetType(IngestColumnRequest.TargetTypeEnum) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
 
setTitle(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
setTo(Object) - Method in class org.genesys.amphibian.client.model.ValueMapping
 
setTotalElements(Long) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
setTotalValues(Long) - Method in class org.genesys.amphibian.client.model.StatisticsData
 
setType(FieldFilter.TypeEnum) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
setUnique(Boolean) - Method in class org.genesys.amphibian.client.model.Descriptor
 
setUserAgent(String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Set the User-Agent header's value (by adding to the default header map).
setUsername(String) - Method in class org.genesys.amphibian.client.invoker.auth.HttpBasicAuth
 
setV(List<Object>) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
setValue(Long) - Method in class org.genesys.amphibian.client.model.Bin
 
setValue(String) - Method in class org.genesys.amphibian.client.model.Category
 
setValue(String) - Method in class org.genesys.amphibian.client.model.LongToWide
 
setValueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
 
setValueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
setValueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
setValueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
setVersion(Long) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
setVersion(Long) - Method in class org.genesys.amphibian.client.model.Preview
 
sheet(Integer) - Method in class org.genesys.amphibian.client.model.LongToWide
 
sheets(List<PreviewSheet>) - Method in class org.genesys.amphibian.client.model.Preview
 
sources(Map<String, Map<String, DataSource>>) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
 
SSV - org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
 
startRow(Integer) - Method in class org.genesys.amphibian.client.model.LongToWide
 
state(DatasetTableExtras.StateEnum) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
 
state(Preview.StateEnum) - Method in class org.genesys.amphibian.client.model.Preview
 
StatisticsData - Class in org.genesys.amphibian.client.model
StatisticsData
StatisticsData() - Constructor for class org.genesys.amphibian.client.model.StatisticsData
 
streamObservations(String, List<UUID>, Integer, UUID, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Get accession observations from this dataset using cursor
streamObservationsWithHttpInfo(String, List<UUID>, Integer, UUID, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Get accession observations from this dataset using cursor
streamUuid(UUID) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
STRING - org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
 
sw(Set<String>) - Method in class org.genesys.amphibian.client.model.FieldFilter
 

T

targetType(IngestColumnRequest.TargetTypeEnum) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
 
TEXT - org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
 
TEXT - org.genesys.amphibian.client.model.FieldFilter.TypeEnum
 
title(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
to(Object) - Method in class org.genesys.amphibian.client.model.ValueMapping
 
toString() - Method in class org.genesys.amphibian.client.model.ApiErrorException
 
toString() - Method in class org.genesys.amphibian.client.model.Bin
 
toString() - Method in class org.genesys.amphibian.client.model.Category
 
toString() - Method in class org.genesys.amphibian.client.model.DatasetTable
 
toString() - Method in enum org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
 
toString() - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
 
toString() - Method in class org.genesys.amphibian.client.model.DataSource
 
toString() - Method in enum org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
 
toString() - Method in class org.genesys.amphibian.client.model.Descriptor
 
toString() - Method in class org.genesys.amphibian.client.model.FieldFilter
 
toString() - Method in enum org.genesys.amphibian.client.model.FieldFilter.TypeEnum
 
toString() - Method in class org.genesys.amphibian.client.model.HeatMap
 
toString() - Method in enum org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
 
toString() - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
 
toString() - Method in class org.genesys.amphibian.client.model.IngestRequest
 
toString() - Method in class org.genesys.amphibian.client.model.LongToWide
 
toString() - Method in class org.genesys.amphibian.client.model.ObservationChart
 
toString() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
 
toString() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
toString() - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
toString() - Method in enum org.genesys.amphibian.client.model.Preview.StateEnum
 
toString() - Method in class org.genesys.amphibian.client.model.Preview
 
toString() - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
 
toString() - Method in class org.genesys.amphibian.client.model.PreviewSheet
 
toString() - Method in class org.genesys.amphibian.client.model.RowMetadata
 
toString() - Method in class org.genesys.amphibian.client.model.StatisticsData
 
toString() - Method in class org.genesys.amphibian.client.model.TraitDataFilter
 
toString() - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
toString() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
toString() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
toString() - Method in class org.genesys.amphibian.client.model.ValueMapping
 
totalElements(Long) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
 
totalValues(Long) - Method in class org.genesys.amphibian.client.model.StatisticsData
 
TraitDataFilter - Class in org.genesys.amphibian.client.model
Data filters
TraitDataFilter() - Constructor for class org.genesys.amphibian.client.model.TraitDataFilter
 
TSV - org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
 
type(FieldFilter.TypeEnum) - Method in class org.genesys.amphibian.client.model.FieldFilter
 
TYPE_DATE - Static variable in class org.genesys.amphibian.client.model.FieldFilter
 
TYPE_NUMBER - Static variable in class org.genesys.amphibian.client.model.FieldFilter
 
TYPE_TEXT - Static variable in class org.genesys.amphibian.client.model.FieldFilter
 

U

unique(Boolean) - Method in class org.genesys.amphibian.client.model.Descriptor
 
updateParamsForAuth(String[], MultiValueMap<String, String>, HttpHeaders, MultiValueMap<String, String>) - Method in class org.genesys.amphibian.client.invoker.ApiClient
Update query and header parameters based on authentication settings.
updateTable(DatasetTable) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Update table
updateTableWithHttpInfo(DatasetTable) - Method in class org.genesys.amphibian.client.api.DatasetsApi
Update table
UPLOADED - org.genesys.amphibian.client.model.Preview.StateEnum
 
URL - Variable in class org.genesys.amphibian.client.invoker.ServerConfiguration
 
URL() - Method in class org.genesys.amphibian.client.invoker.ServerConfiguration
Format URL template using default server variables.
URL(Map<String, String>) - Method in class org.genesys.amphibian.client.invoker.ServerConfiguration
Format URL template using given variables.

V

v(List<Object>) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
 
validateCategorical(UUID, Integer, Long, ValidateCategoricalRequest) - Method in class org.genesys.amphibian.client.api.PreviewApi
Assert that field values correspond to constraints for CATEGORICAL data
ValidateCategoricalRequest - Class in org.genesys.amphibian.client.model
ValidateCategoricalRequest
ValidateCategoricalRequest() - Constructor for class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
validateCategoricalWithHttpInfo(UUID, Integer, Long, ValidateCategoricalRequest) - Method in class org.genesys.amphibian.client.api.PreviewApi
Assert that field values correspond to constraints for CATEGORICAL data
validateNumeric(UUID, Integer, Long, ValidateNumericRequest) - Method in class org.genesys.amphibian.client.api.PreviewApi
Assert that field values correspond to constraints for TEXT data
ValidateNumericRequest - Class in org.genesys.amphibian.client.model
ValidateNumericRequest
ValidateNumericRequest() - Constructor for class org.genesys.amphibian.client.model.ValidateNumericRequest
 
validateNumericWithHttpInfo(UUID, Integer, Long, ValidateNumericRequest) - Method in class org.genesys.amphibian.client.api.PreviewApi
Assert that field values correspond to constraints for TEXT data
validateText(UUID, Integer, Long, ValidateTextRequest) - Method in class org.genesys.amphibian.client.api.PreviewApi
Assert that field values correspond to constraints for TEXT data
ValidateTextRequest - Class in org.genesys.amphibian.client.model
ValidateTextRequest
ValidateTextRequest() - Constructor for class org.genesys.amphibian.client.model.ValidateTextRequest
 
validateTextWithHttpInfo(UUID, Integer, Long, ValidateTextRequest) - Method in class org.genesys.amphibian.client.api.PreviewApi
Assert that field values correspond to constraints for TEXT data
value(Long) - Method in class org.genesys.amphibian.client.model.Bin
 
value(String) - Method in class org.genesys.amphibian.client.model.Category
 
value(String) - Method in class org.genesys.amphibian.client.model.LongToWide
 
valueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
 
valueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
 
valueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
 
valueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
 
ValueMapping - Class in org.genesys.amphibian.client.model
ValueMapping
ValueMapping() - Constructor for class org.genesys.amphibian.client.model.ValueMapping
 
valueOf(String) - Static method in enum org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.genesys.amphibian.client.model.FieldFilter.TypeEnum
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.genesys.amphibian.client.model.Preview.StateEnum
Returns the enum constant of this type with the specified name.
values() - Static method in enum org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.genesys.amphibian.client.model.FieldFilter.TypeEnum
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.genesys.amphibian.client.model.Preview.StateEnum
Returns an array containing the constants of this enum type, in the order they are declared.
variables - Variable in class org.genesys.amphibian.client.invoker.ServerConfiguration
 
version(Long) - Method in class org.genesys.amphibian.client.model.DatasetTable
 
version(Long) - Method in class org.genesys.amphibian.client.model.Preview
 

_

_file(File) - Method in class org.genesys.amphibian.client.model.IngestRequest
 
A B C D E F G H I J K L M N O P R S T U V _ 
All Classes All Packages