A B C D E F G H I J K L M N O P R S T U V _
All Classes All Packages
All Classes All Packages
All Classes All Packages
A
- acceptedCategories(List<String>) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- accession(Set<UUID>) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
- accession(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- accessionNumber(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- addAcceptedCategoriesItem(String) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- addAccessionItem(UUID) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
- addBinsItem(Bin) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- addCategoriesItem(Category) - Method in class org.genesys.amphibian.client.model.ObservationChart
- addContainsItem(String) - Method in class org.genesys.amphibian.client.model.FieldFilter
- addCookiesToRequest(MultiValueMap<String, String>, RequestEntity.BodyBuilder) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Add cookies to the request that is being built
- addDataItem(Object) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
- addDefaultCookie(String, String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Add a default cookie.
- addDefaultHeader(String, String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Add a default header.
- addDescriptorsItem(Descriptor) - Method in class org.genesys.amphibian.client.model.PreviewSheet
- addDistinctValuesItem(Object) - Method in class org.genesys.amphibian.client.model.StatisticsData
- addEqItem(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
- addErrorsItem(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- addExamplesItem(Object) - Method in class org.genesys.amphibian.client.model.Descriptor
- addHeadersToRequest(HttpHeaders, RequestEntity.BodyBuilder) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Add headers to the request that is being built
- addMetadata(UUID, List<RowMetadata>) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Add metadata to ingested rows
- addMetadataWithHttpInfo(UUID, List<RowMetadata>) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Add metadata to ingested rows
- addObservations(String, ObservationRegistration) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Add observations, returns result of update Add accession observations
- addObservationsWithHttpInfo(String, ObservationRegistration) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Add observations, returns result of update Add accession observations
- addRowsItem(String) - Method in class org.genesys.amphibian.client.model.LongToWide
- addSheetsItem(PreviewSheet) - Method in class org.genesys.amphibian.client.model.Preview
- addSwItem(String) - Method in class org.genesys.amphibian.client.model.FieldFilter
- addValueMappingItem(ValueMapping) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
- addValueMappingItem(ValueMapping) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- addValueMappingItem(ValueMapping) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- addValueMappingItem(ValueMapping) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- addVItem(Object) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- ApiClient - Class in org.genesys.amphibian.client.invoker
- ApiClient() - Constructor for class org.genesys.amphibian.client.invoker.ApiClient
- ApiClient(RestTemplate) - Constructor for class org.genesys.amphibian.client.invoker.ApiClient
- ApiClient.CollectionFormat - Enum in org.genesys.amphibian.client.invoker
- ApiErrorException - Class in org.genesys.amphibian.client.model
-
ApiErrorException
- ApiErrorException() - Constructor for class org.genesys.amphibian.client.model.ApiErrorException
- ApiKeyAuth - Class in org.genesys.amphibian.client.invoker.auth
- ApiKeyAuth(String, String) - Constructor for class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
- applyToParams(MultiValueMap<String, String>, HttpHeaders, MultiValueMap<String, String>) - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
- applyToParams(MultiValueMap<String, String>, HttpHeaders, MultiValueMap<String, String>) - Method in interface org.genesys.amphibian.client.invoker.auth.Authentication
-
Apply authentication settings to header and / or query parameters.
- applyToParams(MultiValueMap<String, String>, HttpHeaders, MultiValueMap<String, String>) - Method in class org.genesys.amphibian.client.invoker.auth.HttpBasicAuth
- applyToParams(MultiValueMap<String, String>, HttpHeaders, MultiValueMap<String, String>) - Method in class org.genesys.amphibian.client.invoker.auth.HttpBearerAuth
- arraySeparator(String) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
- arraySeparator(String) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- arraySeparator(String) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- arraySeparator(String) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- Authentication - Interface in org.genesys.amphibian.client.invoker.auth
B
- Bin - Class in org.genesys.amphibian.client.model
-
Bin
- Bin() - Constructor for class org.genesys.amphibian.client.model.Bin
- bins(List<Bin>) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- buildRestTemplate() - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Build the RestTemplate used to make HTTP requests.
- BUSY - org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
C
- c(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- categories(List<Category>) - Method in class org.genesys.amphibian.client.model.ObservationChart
- categories(Map<String, List<Object>>) - Method in class org.genesys.amphibian.client.model.HeatMap
- Category - Class in org.genesys.amphibian.client.model
-
Category
- Category() - Constructor for class org.genesys.amphibian.client.model.Category
- clone() - Method in class org.genesys.amphibian.client.invoker.RFC3339DateFormat
- CODED - org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
- collection(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
- collectionPathParameterToString(ApiClient.CollectionFormat, Collection<?>) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Formats the specified collection path parameter to a string value.
- column(String) - Method in class org.genesys.amphibian.client.model.LongToWide
- columnName(String) - Method in class org.genesys.amphibian.client.model.Descriptor
- columns(Map<String, Map<String, Object>>) - Method in class org.genesys.amphibian.client.model.DatasetTable
- columns(Map<String, Map<String, Object>>) - Method in class org.genesys.amphibian.client.model.DataSource
- contains(Set<String>) - Method in class org.genesys.amphibian.client.model.FieldFilter
- contentLength(Long) - Method in class org.genesys.amphibian.client.model.Preview
- contentType(String) - Method in class org.genesys.amphibian.client.model.IngestRequest
- context(Object) - Method in class org.genesys.amphibian.client.model.ApiErrorException
- count(Long) - Method in class org.genesys.amphibian.client.model.Category
- createdDate(Date) - Method in class org.genesys.amphibian.client.model.DatasetTable
- createdDate(Date) - Method in class org.genesys.amphibian.client.model.Preview
- createTable(DatasetTable) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Create a new table
- createTableWithHttpInfo(DatasetTable) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Create a new table
- CSV - org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
D
- d(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- data(Boolean) - Method in class org.genesys.amphibian.client.model.DataSource
- data(List<Object>) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
- DatasetsApi - Class in org.genesys.amphibian.client.api
- DatasetsApi() - Constructor for class org.genesys.amphibian.client.api.DatasetsApi
- DatasetsApi(ApiClient) - Constructor for class org.genesys.amphibian.client.api.DatasetsApi
- DatasetTable - Class in org.genesys.amphibian.client.model
-
Table definition
- DatasetTable() - Constructor for class org.genesys.amphibian.client.model.DatasetTable
- DatasetTableExtras - Class in org.genesys.amphibian.client.model
-
DatasetTableExtras
- DatasetTableExtras() - Constructor for class org.genesys.amphibian.client.model.DatasetTableExtras
- DatasetTableExtras.StateEnum - Enum in org.genesys.amphibian.client.model
-
Gets or Sets state
- DataSource - Class in org.genesys.amphibian.client.model
-
DataSource
- DataSource() - Constructor for class org.genesys.amphibian.client.model.DataSource
- dataType(Descriptor.DataTypeEnum) - Method in class org.genesys.amphibian.client.model.Descriptor
- DATE - org.genesys.amphibian.client.model.FieldFilter.TypeEnum
- DECIMAL - org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
- defaultValue - Variable in class org.genesys.amphibian.client.invoker.ServerVariable
- deletePreview(UUID) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Remove the overview of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
- deletePreviewWithHttpInfo(UUID) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Remove the overview of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
- description - Variable in class org.genesys.amphibian.client.invoker.ServerConfiguration
- description - Variable in class org.genesys.amphibian.client.invoker.ServerVariable
- descriptor(UUID) - Method in class org.genesys.amphibian.client.model.ObservationChart
- descriptor(UUID) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- descriptor(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- Descriptor - Class in org.genesys.amphibian.client.model
-
Descriptor
- Descriptor() - Constructor for class org.genesys.amphibian.client.model.Descriptor
- Descriptor.DataTypeEnum - Enum in org.genesys.amphibian.client.model
-
Gets or Sets dataType
- descriptors(List<Descriptor>) - Method in class org.genesys.amphibian.client.model.PreviewSheet
- descriptorSources(Map<String, Set<UUID>>) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
- distinctValues(Set<Object>) - Method in class org.genesys.amphibian.client.model.StatisticsData
- doi(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- DRAFT - org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
- dropTable(DatasetTable) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Drop a table
- dropTableWithHttpInfo(DatasetTable) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Drop a table
E
- encoding(String) - Method in class org.genesys.amphibian.client.model.IngestRequest
- enumValues - Variable in class org.genesys.amphibian.client.invoker.ServerVariable
- eq(Set<Object>) - Method in class org.genesys.amphibian.client.model.FieldFilter
- equals(Object) - Method in class org.genesys.amphibian.client.model.ApiErrorException
- equals(Object) - Method in class org.genesys.amphibian.client.model.Bin
- equals(Object) - Method in class org.genesys.amphibian.client.model.Category
- equals(Object) - Method in class org.genesys.amphibian.client.model.DatasetTable
- equals(Object) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
- equals(Object) - Method in class org.genesys.amphibian.client.model.DataSource
- equals(Object) - Method in class org.genesys.amphibian.client.model.Descriptor
- equals(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
- equals(Object) - Method in class org.genesys.amphibian.client.model.HeatMap
- equals(Object) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
- equals(Object) - Method in class org.genesys.amphibian.client.model.IngestRequest
- equals(Object) - Method in class org.genesys.amphibian.client.model.LongToWide
- equals(Object) - Method in class org.genesys.amphibian.client.model.ObservationChart
- equals(Object) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- equals(Object) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- equals(Object) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
- equals(Object) - Method in class org.genesys.amphibian.client.model.Preview
- equals(Object) - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
- equals(Object) - Method in class org.genesys.amphibian.client.model.PreviewSheet
- equals(Object) - Method in class org.genesys.amphibian.client.model.RowMetadata
- equals(Object) - Method in class org.genesys.amphibian.client.model.StatisticsData
- equals(Object) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
- equals(Object) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- equals(Object) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- equals(Object) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- equals(Object) - Method in class org.genesys.amphibian.client.model.ValueMapping
- error(String) - Method in class org.genesys.amphibian.client.model.ApiErrorException
- error(String) - Method in class org.genesys.amphibian.client.model.Preview
- errors(List<String>) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- examples(Set<Object>) - Method in class org.genesys.amphibian.client.model.Descriptor
- expandPath(String, Map<String, Object>) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Expand path template with variables
- expires(Date) - Method in class org.genesys.amphibian.client.model.IngestRequest
- expires(Date) - Method in class org.genesys.amphibian.client.model.Preview
- extras(DatasetTableExtras) - Method in class org.genesys.amphibian.client.model.DatasetTable
F
- f(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- FAILED - org.genesys.amphibian.client.model.Preview.StateEnum
- field(String) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
- field(String) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- field(String) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- field(String) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- FieldFilter - Class in org.genesys.amphibian.client.model
-
FieldFilter
- FieldFilter() - Constructor for class org.genesys.amphibian.client.model.FieldFilter
- FieldFilter.TypeEnum - Enum in org.genesys.amphibian.client.model
-
Gets or Sets type
- fields(Map<String, FieldFilter>) - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
- firstRow(Long) - Method in class org.genesys.amphibian.client.model.DataSource
- format(Date, StringBuffer, FieldPosition) - Method in class org.genesys.amphibian.client.invoker.RFC3339DateFormat
- formatDate(Date) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Format the given Date object into string.
- from(Object) - Method in class org.genesys.amphibian.client.model.ValueMapping
- fromValue(String) - Static method in enum org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
- fromValue(String) - Static method in enum org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
- fromValue(String) - Static method in enum org.genesys.amphibian.client.model.FieldFilter.TypeEnum
- fromValue(String) - Static method in enum org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
- fromValue(String) - Static method in enum org.genesys.amphibian.client.model.Preview.StateEnum
G
- ge(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
- generateDescriptors(UUID) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Generate descriptors for all PreviewSheets of given Preview
- generateDescriptorsWithHttpInfo(UUID) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Generate descriptors for all PreviewSheets of given Preview
- generateQueryUri(MultiValueMap<String, String>, Map<String, Object>) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Include queryParams in uriParams taking into account the paramName
- genus(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- getAcceptedCategories() - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
-
Get acceptedCategories
- getAccession() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get accession
- getAccession() - Method in class org.genesys.amphibian.client.model.TraitDataFilter
-
Get accession
- getAccessionDatasetObservations(List<String>, List<UUID>, Integer, Integer, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Get accession observations from datasets
- getAccessionDatasetObservationsWithHttpInfo(List<String>, List<UUID>, Integer, Integer, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Get accession observations from datasets
- getAccessionNumber() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get accessionNumber
- getApiClient() - Method in class org.genesys.amphibian.client.api.DatasetsApi
- getApiClient() - Method in class org.genesys.amphibian.client.api.InfoApi
- getApiClient() - Method in class org.genesys.amphibian.client.api.PreviewApi
- getApiKey() - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
- getApiKeyPrefix() - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
- getArraySeparator() - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
-
Get arraySeparator
- getArraySeparator() - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
-
Get arraySeparator
- getArraySeparator() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
-
Get arraySeparator
- getArraySeparator() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
-
Get arraySeparator
- getAuthentication(String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Get authentication for the given name.
- getAuthentications() - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Get authentications (key: authentication name, value: authentication).
- getBasePath() - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Get the current base path
- getBearerToken() - Method in class org.genesys.amphibian.client.invoker.auth.HttpBearerAuth
- getBins() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
-
Get bins
- getC() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get c
- getCategories() - Method in class org.genesys.amphibian.client.model.HeatMap
-
Get categories
- getCategories() - Method in class org.genesys.amphibian.client.model.ObservationChart
-
Get categories
- getCollection() - Method in class org.genesys.amphibian.client.model.DatasetTable
-
Get collection
- getColumn() - Method in class org.genesys.amphibian.client.model.LongToWide
-
Get column
- getColumnName() - Method in class org.genesys.amphibian.client.model.Descriptor
-
Get columnName
- getColumns() - Method in class org.genesys.amphibian.client.model.DatasetTable
-
Get columns
- getColumns() - Method in class org.genesys.amphibian.client.model.DataSource
-
Get columns
- getContains() - Method in class org.genesys.amphibian.client.model.FieldFilter
-
Get contains
- getContentLength() - Method in class org.genesys.amphibian.client.model.Preview
-
Get contentLength
- getContentType() - Method in class org.genesys.amphibian.client.model.IngestRequest
-
Optionally provide file content type
- getContext() - Method in class org.genesys.amphibian.client.model.ApiErrorException
-
Get context
- getCount() - Method in class org.genesys.amphibian.client.model.Category
-
Get count
- getCreatedDate() - Method in class org.genesys.amphibian.client.model.DatasetTable
-
Get createdDate
- getCreatedDate() - Method in class org.genesys.amphibian.client.model.Preview
-
Get createdDate
- getD() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get d
- getData() - Method in class org.genesys.amphibian.client.model.DataSource
-
Get data
- getData() - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
-
Get data
- getData(UUID, Integer, Long, Integer, List<String>, PreviewDataFilter) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Get the overview of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
- getDataset(String) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Get dataset information
- getDatasets(List<String>) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Get list of datasets information
- getDatasetsWithHttpInfo(List<String>) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Get list of datasets information
- getDatasetWithHttpInfo(String) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Get dataset information
- getDataType() - Method in class org.genesys.amphibian.client.model.Descriptor
-
Get dataType
- getDataWithHttpInfo(UUID, Integer, Long, Integer, List<String>, PreviewDataFilter) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Get the overview of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
- getDateFormat() - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Get the date format used to parse/format date parameters.
- getDescriptor() - Method in class org.genesys.amphibian.client.model.ObservationChart
-
Get descriptor
- getDescriptor() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
-
Get descriptor
- getDescriptor() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get descriptor
- getDescriptors() - Method in class org.genesys.amphibian.client.model.PreviewSheet
-
Get descriptors
- getDescriptorSources() - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
-
Get descriptorSources
- getDistinctValues() - Method in class org.genesys.amphibian.client.model.StatisticsData
-
Get distinctValues
- getDoi() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get doi
- getEncoding() - Method in class org.genesys.amphibian.client.model.IngestRequest
-
Optionally provide character encoding
- getEq() - Method in class org.genesys.amphibian.client.model.FieldFilter
-
Get eq
- getError() - Method in class org.genesys.amphibian.client.model.ApiErrorException
-
Get error
- getError() - Method in class org.genesys.amphibian.client.model.Preview
-
Get error
- getErrors() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get errors
- getExamples() - Method in class org.genesys.amphibian.client.model.Descriptor
-
Get examples
- getExpires() - Method in class org.genesys.amphibian.client.model.IngestRequest
-
Set the date after the ingested file may be removed from the database (defaults to default expiration period)
- getExpires() - Method in class org.genesys.amphibian.client.model.Preview
-
Get expires
- getExtras() - Method in class org.genesys.amphibian.client.model.DatasetTable
-
Get extras
- getF() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get f
- getField() - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
-
Get field
- getField() - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
-
Get field
- getField() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
-
Get field
- getField() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
-
Get field
- getFields() - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
-
Get fields
- getFile() - Method in class org.genesys.amphibian.client.model.IngestRequest
-
The file to ingest into the database
- getFirstRow() - Method in class org.genesys.amphibian.client.model.DataSource
-
Get firstRow
- getFrom() - Method in class org.genesys.amphibian.client.model.ValueMapping
-
Get from
- getGe() - Method in class org.genesys.amphibian.client.model.FieldFilter
-
Get ge
- getGenus() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get genus
- getGt() - Method in class org.genesys.amphibian.client.model.FieldFilter
-
Get gt
- getHeatMap() - Method in class org.genesys.amphibian.client.model.HeatMap
-
Get heatMap
- getHeatMapData(String, UUID, UUID, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Generate a heat map Calculate a heat map of observations for two selected categorical descriptors in DatasetTable
- getHeatMapDataWithHttpInfo(String, UUID, UUID, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Generate a heat map Calculate a heat map of observations for two selected categorical descriptors in DatasetTable
- getId() - Method in class org.genesys.amphibian.client.model.DatasetTable
-
Get id
- getId() - Method in class org.genesys.amphibian.client.model.Preview
-
Get id
- getIndex() - Method in class org.genesys.amphibian.client.model.PreviewSheet
-
Get index
- getInstituteCode() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get instituteCode
- getIntegerOnly() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
-
Get integerOnly
- getIsAccessionMapped() - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
-
Get isAccessionMapped
- getKey() - Method in class org.genesys.amphibian.client.model.DatasetTable
-
Get key
- getLe() - Method in class org.genesys.amphibian.client.model.FieldFilter
-
Get le
- getLocalizedError() - Method in class org.genesys.amphibian.client.model.ApiErrorException
-
Get localizedError
- getLocation() - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
- getLt() - Method in class org.genesys.amphibian.client.model.FieldFilter
-
Get lt
- getMax() - Method in class org.genesys.amphibian.client.model.Bin
-
Get max
- getMax() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
-
Get max
- getMax() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
-
Get max
- getMaxLength() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
-
Get maxLength
- getMeta() - Method in class org.genesys.amphibian.client.model.RowMetadata
-
Get meta
- getMin() - Method in class org.genesys.amphibian.client.model.Bin
-
Get min
- getMin() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
-
Get min
- getMin() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
-
Get min
- getModifiedDate() - Method in class org.genesys.amphibian.client.model.DatasetTable
-
Get modifiedDate
- getModifiedDate() - Method in class org.genesys.amphibian.client.model.Preview
-
Get modifiedDate
- getName() - Method in class org.genesys.amphibian.client.model.Preview
-
Get name
- getName() - Method in class org.genesys.amphibian.client.model.PreviewSheet
-
Get name
- getNullValues() - Method in class org.genesys.amphibian.client.model.ObservationChart
-
Get nullValues
- getNullValues() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
-
Get nullValues
- getNumberOfDistinct() - Method in class org.genesys.amphibian.client.model.StatisticsData
-
Get numberOfDistinct
- getNumberOfNull() - Method in class org.genesys.amphibian.client.model.Descriptor
-
Get numberOfNull
- getNumberOfNull() - Method in class org.genesys.amphibian.client.model.StatisticsData
-
Get numberOfNull
- getObservations() - Method in class org.genesys.amphibian.client.model.TraitDataFilter
-
Get observations
- getObservations(String, List<UUID>, Integer, Integer, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Get accession observations from this dataset
- getObservationsCharts(String, List<UUID>, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Generate charts Get charts of integer and coded observations from this dataset
- getObservationsChartsWithHttpInfo(String, List<UUID>, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Generate charts Get charts of integer and coded observations from this dataset
- getObservationsHistogram(String, List<UUID>, Integer, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Generate histograms Get histogram of numerical observations from this dataset
- getObservationsHistogramWithHttpInfo(String, List<UUID>, Integer, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Generate histograms Get histogram of numerical observations from this dataset
- getObservationsWithHttpInfo(String, List<UUID>, Integer, Integer, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Get accession observations from this dataset
- getParamName() - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
- getPassword() - Method in class org.genesys.amphibian.client.invoker.auth.HttpBasicAuth
- getPreview(UUID) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Get the overview of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
- getPreviewWithHttpInfo(UUID) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Get the overview of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
- getR() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get r
- getR() - Method in class org.genesys.amphibian.client.model.RowMetadata
-
Get r
- getReferenceUuid() - Method in class org.genesys.amphibian.client.model.Preview
-
Get referenceUuid
- getRegExp() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
-
Get regExp
- getRowCount() - Method in class org.genesys.amphibian.client.model.PreviewSheet
-
Get rowCount
- getRows() - Method in class org.genesys.amphibian.client.model.LongToWide
-
Get rows
- getS() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get s
- getS() - Method in class org.genesys.amphibian.client.model.RowMetadata
-
Get s
- getSheet() - Method in class org.genesys.amphibian.client.model.LongToWide
-
Get sheet
- getSheets() - Method in class org.genesys.amphibian.client.model.Preview
-
Get sheets
- getSources() - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
-
Get sources
- getStartRow() - Method in class org.genesys.amphibian.client.model.LongToWide
-
Get startRow
- getState() - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
-
Get state
- getState() - Method in class org.genesys.amphibian.client.model.Preview
-
Get state
- getStatisticsData(UUID, Integer, List<String>, Long, Integer) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Get the statistics of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
- getStatisticsDataWithHttpInfo(UUID, Integer, List<String>, Long, Integer) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Get the statistics of the parsed dataset Use the same reference UUID as provided when ingesting a dataset
- getStreamUuid() - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
-
Get streamUuid
- getSw() - Method in class org.genesys.amphibian.client.model.FieldFilter
-
Get sw
- getTargetType() - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
-
Get targetType
- getTitle() - Method in class org.genesys.amphibian.client.model.DatasetTable
-
Get title
- getTo() - Method in class org.genesys.amphibian.client.model.ValueMapping
-
Get to
- getTotalElements() - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
-
Get totalElements
- getTotalValues() - Method in class org.genesys.amphibian.client.model.StatisticsData
-
Get totalValues
- getType() - Method in class org.genesys.amphibian.client.model.FieldFilter
-
Get type
- getUnique() - Method in class org.genesys.amphibian.client.model.Descriptor
-
Get unique
- getUsername() - Method in class org.genesys.amphibian.client.invoker.auth.HttpBasicAuth
- getV() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
-
Get v
- getValue() - Method in class org.genesys.amphibian.client.model.Bin
-
Get value
- getValue() - Method in class org.genesys.amphibian.client.model.Category
-
Get value
- getValue() - Method in enum org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
- getValue() - Method in enum org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
- getValue() - Method in enum org.genesys.amphibian.client.model.FieldFilter.TypeEnum
- getValue() - Method in enum org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
- getValue() - Method in class org.genesys.amphibian.client.model.LongToWide
-
Get value
- getValue() - Method in enum org.genesys.amphibian.client.model.Preview.StateEnum
- getValueMapping() - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
-
Get valueMapping
- getValueMapping() - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
-
Get valueMapping
- getValueMapping() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
-
Get valueMapping
- getValueMapping() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
-
Get valueMapping
- getVersion() - Method in class org.genesys.amphibian.client.api.InfoApi
-
Get Amphibian version
- getVersion() - Method in class org.genesys.amphibian.client.model.DatasetTable
-
Get version
- getVersion() - Method in class org.genesys.amphibian.client.model.Preview
-
Get version
- getVersionWithHttpInfo() - Method in class org.genesys.amphibian.client.api.InfoApi
-
Get Amphibian version
- gt(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
H
- hashCode() - Method in class org.genesys.amphibian.client.model.ApiErrorException
- hashCode() - Method in class org.genesys.amphibian.client.model.Bin
- hashCode() - Method in class org.genesys.amphibian.client.model.Category
- hashCode() - Method in class org.genesys.amphibian.client.model.DatasetTable
- hashCode() - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
- hashCode() - Method in class org.genesys.amphibian.client.model.DataSource
- hashCode() - Method in class org.genesys.amphibian.client.model.Descriptor
- hashCode() - Method in class org.genesys.amphibian.client.model.FieldFilter
- hashCode() - Method in class org.genesys.amphibian.client.model.HeatMap
- hashCode() - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
- hashCode() - Method in class org.genesys.amphibian.client.model.IngestRequest
- hashCode() - Method in class org.genesys.amphibian.client.model.LongToWide
- hashCode() - Method in class org.genesys.amphibian.client.model.ObservationChart
- hashCode() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- hashCode() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- hashCode() - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
- hashCode() - Method in class org.genesys.amphibian.client.model.Preview
- hashCode() - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
- hashCode() - Method in class org.genesys.amphibian.client.model.PreviewSheet
- hashCode() - Method in class org.genesys.amphibian.client.model.RowMetadata
- hashCode() - Method in class org.genesys.amphibian.client.model.StatisticsData
- hashCode() - Method in class org.genesys.amphibian.client.model.TraitDataFilter
- hashCode() - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- hashCode() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- hashCode() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- hashCode() - Method in class org.genesys.amphibian.client.model.ValueMapping
- heatMap(Map<String, Map<String, Integer>>) - Method in class org.genesys.amphibian.client.model.HeatMap
- HeatMap - Class in org.genesys.amphibian.client.model
-
HeatMap
- HeatMap() - Constructor for class org.genesys.amphibian.client.model.HeatMap
- HttpBasicAuth - Class in org.genesys.amphibian.client.invoker.auth
- HttpBasicAuth() - Constructor for class org.genesys.amphibian.client.invoker.auth.HttpBasicAuth
- HttpBearerAuth - Class in org.genesys.amphibian.client.invoker.auth
- HttpBearerAuth(String) - Constructor for class org.genesys.amphibian.client.invoker.auth.HttpBearerAuth
I
- id(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
- id(String) - Method in class org.genesys.amphibian.client.model.Preview
- index(Integer) - Method in class org.genesys.amphibian.client.model.PreviewSheet
- InfoApi - Class in org.genesys.amphibian.client.api
- InfoApi() - Constructor for class org.genesys.amphibian.client.api.InfoApi
- InfoApi(ApiClient) - Constructor for class org.genesys.amphibian.client.api.InfoApi
- ingest(UUID, Date, String, String, File) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Ingest a new dataset Ingests Excel, CSV or TSV files for preview
- IngestColumnRequest - Class in org.genesys.amphibian.client.model
-
IngestColumnRequest
- IngestColumnRequest() - Constructor for class org.genesys.amphibian.client.model.IngestColumnRequest
- IngestColumnRequest.TargetTypeEnum - Enum in org.genesys.amphibian.client.model
-
Gets or Sets targetType
- ingestFromPreview(String, UUID, UUID, Integer, Long, IngestColumnRequest) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Ingest column values from Preview to Table
- ingestFromPreviewWithHttpInfo(String, UUID, UUID, Integer, Long, IngestColumnRequest) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Ingest column values from Preview to Table
- IngestRequest - Class in org.genesys.amphibian.client.model
-
IngestRequest
- IngestRequest() - Constructor for class org.genesys.amphibian.client.model.IngestRequest
- ingestWithHttpInfo(UUID, Date, String, String, File) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Ingest a new dataset Ingests Excel, CSV or TSV files for preview
- init() - Method in class org.genesys.amphibian.client.invoker.ApiClient
- instituteCode(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- INTEGER - org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
- integerOnly(Boolean) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- invokeAPI(String, HttpMethod, Map<String, Object>, MultiValueMap<String, String>, Object, HttpHeaders, MultiValueMap<String, String>, MultiValueMap<String, Object>, List<MediaType>, MediaType, String[], ParameterizedTypeReference<T>) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Invoke API by sending HTTP request with the given options.
- isAccessionMapped(Boolean) - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
- isDebugging() - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Check that whether debugging is enabled for this API client.
- isJsonMime(String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Check if the given
Stringis a JSON MIME. - isJsonMime(MediaType) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Check if the given MIME is a JSON MIME.
- isProblemJsonMime(String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Check if the given
Stringis a Problem JSON MIME (RFC-7807).
J
- JSON_PROPERTY_ACCEPTED_CATEGORIES - Static variable in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- JSON_PROPERTY_ACCESSION - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_ACCESSION - Static variable in class org.genesys.amphibian.client.model.TraitDataFilter
- JSON_PROPERTY_ACCESSION_NUMBER - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_ARRAY_SEPARATOR - Static variable in class org.genesys.amphibian.client.model.IngestColumnRequest
- JSON_PROPERTY_ARRAY_SEPARATOR - Static variable in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- JSON_PROPERTY_ARRAY_SEPARATOR - Static variable in class org.genesys.amphibian.client.model.ValidateNumericRequest
- JSON_PROPERTY_ARRAY_SEPARATOR - Static variable in class org.genesys.amphibian.client.model.ValidateTextRequest
- JSON_PROPERTY_BINS - Static variable in class org.genesys.amphibian.client.model.ObservationHistogram
- JSON_PROPERTY_C - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_CATEGORIES - Static variable in class org.genesys.amphibian.client.model.HeatMap
- JSON_PROPERTY_CATEGORIES - Static variable in class org.genesys.amphibian.client.model.ObservationChart
- JSON_PROPERTY_COLLECTION - Static variable in class org.genesys.amphibian.client.model.DatasetTable
- JSON_PROPERTY_COLUMN - Static variable in class org.genesys.amphibian.client.model.LongToWide
- JSON_PROPERTY_COLUMN_NAME - Static variable in class org.genesys.amphibian.client.model.Descriptor
- JSON_PROPERTY_COLUMNS - Static variable in class org.genesys.amphibian.client.model.DatasetTable
- JSON_PROPERTY_COLUMNS - Static variable in class org.genesys.amphibian.client.model.DataSource
- JSON_PROPERTY_CONTAINS - Static variable in class org.genesys.amphibian.client.model.FieldFilter
- JSON_PROPERTY_CONTENT_LENGTH - Static variable in class org.genesys.amphibian.client.model.Preview
- JSON_PROPERTY_CONTENT_TYPE - Static variable in class org.genesys.amphibian.client.model.IngestRequest
- JSON_PROPERTY_CONTEXT - Static variable in class org.genesys.amphibian.client.model.ApiErrorException
- JSON_PROPERTY_COUNT - Static variable in class org.genesys.amphibian.client.model.Category
- JSON_PROPERTY_CREATED_DATE - Static variable in class org.genesys.amphibian.client.model.DatasetTable
- JSON_PROPERTY_CREATED_DATE - Static variable in class org.genesys.amphibian.client.model.Preview
- JSON_PROPERTY_D - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_DATA - Static variable in class org.genesys.amphibian.client.model.DataSource
- JSON_PROPERTY_DATA - Static variable in class org.genesys.amphibian.client.model.ObservationStreamResponse
- JSON_PROPERTY_DATA_TYPE - Static variable in class org.genesys.amphibian.client.model.Descriptor
- JSON_PROPERTY_DESCRIPTOR - Static variable in class org.genesys.amphibian.client.model.ObservationChart
- JSON_PROPERTY_DESCRIPTOR - Static variable in class org.genesys.amphibian.client.model.ObservationHistogram
- JSON_PROPERTY_DESCRIPTOR - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_DESCRIPTOR_SOURCES - Static variable in class org.genesys.amphibian.client.model.DatasetTableExtras
- JSON_PROPERTY_DESCRIPTORS - Static variable in class org.genesys.amphibian.client.model.PreviewSheet
- JSON_PROPERTY_DISTINCT_VALUES - Static variable in class org.genesys.amphibian.client.model.StatisticsData
- JSON_PROPERTY_DOI - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_ENCODING - Static variable in class org.genesys.amphibian.client.model.IngestRequest
- JSON_PROPERTY_EQ - Static variable in class org.genesys.amphibian.client.model.FieldFilter
- JSON_PROPERTY_ERROR - Static variable in class org.genesys.amphibian.client.model.ApiErrorException
- JSON_PROPERTY_ERROR - Static variable in class org.genesys.amphibian.client.model.Preview
- JSON_PROPERTY_ERRORS - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_EXAMPLES - Static variable in class org.genesys.amphibian.client.model.Descriptor
- JSON_PROPERTY_EXPIRES - Static variable in class org.genesys.amphibian.client.model.IngestRequest
- JSON_PROPERTY_EXPIRES - Static variable in class org.genesys.amphibian.client.model.Preview
- JSON_PROPERTY_EXTRAS - Static variable in class org.genesys.amphibian.client.model.DatasetTable
- JSON_PROPERTY_F - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_FIELD - Static variable in class org.genesys.amphibian.client.model.IngestColumnRequest
- JSON_PROPERTY_FIELD - Static variable in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- JSON_PROPERTY_FIELD - Static variable in class org.genesys.amphibian.client.model.ValidateNumericRequest
- JSON_PROPERTY_FIELD - Static variable in class org.genesys.amphibian.client.model.ValidateTextRequest
- JSON_PROPERTY_FIELDS - Static variable in class org.genesys.amphibian.client.model.PreviewDataFilter
- JSON_PROPERTY_FILE - Static variable in class org.genesys.amphibian.client.model.IngestRequest
- JSON_PROPERTY_FIRST_ROW - Static variable in class org.genesys.amphibian.client.model.DataSource
- JSON_PROPERTY_FROM - Static variable in class org.genesys.amphibian.client.model.ValueMapping
- JSON_PROPERTY_GE - Static variable in class org.genesys.amphibian.client.model.FieldFilter
- JSON_PROPERTY_GENUS - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_GT - Static variable in class org.genesys.amphibian.client.model.FieldFilter
- JSON_PROPERTY_HEAT_MAP - Static variable in class org.genesys.amphibian.client.model.HeatMap
- JSON_PROPERTY_ID - Static variable in class org.genesys.amphibian.client.model.DatasetTable
- JSON_PROPERTY_ID - Static variable in class org.genesys.amphibian.client.model.Preview
- JSON_PROPERTY_INDEX - Static variable in class org.genesys.amphibian.client.model.PreviewSheet
- JSON_PROPERTY_INSTITUTE_CODE - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_INTEGER_ONLY - Static variable in class org.genesys.amphibian.client.model.ValidateNumericRequest
- JSON_PROPERTY_IS_ACCESSION_MAPPED - Static variable in class org.genesys.amphibian.client.model.PreviewDataFilter
- JSON_PROPERTY_KEY - Static variable in class org.genesys.amphibian.client.model.DatasetTable
- JSON_PROPERTY_LE - Static variable in class org.genesys.amphibian.client.model.FieldFilter
- JSON_PROPERTY_LOCALIZED_ERROR - Static variable in class org.genesys.amphibian.client.model.ApiErrorException
- JSON_PROPERTY_LT - Static variable in class org.genesys.amphibian.client.model.FieldFilter
- JSON_PROPERTY_MAX - Static variable in class org.genesys.amphibian.client.model.Bin
- JSON_PROPERTY_MAX - Static variable in class org.genesys.amphibian.client.model.ObservationHistogram
- JSON_PROPERTY_MAX - Static variable in class org.genesys.amphibian.client.model.ValidateNumericRequest
- JSON_PROPERTY_MAX_LENGTH - Static variable in class org.genesys.amphibian.client.model.ValidateTextRequest
- JSON_PROPERTY_META - Static variable in class org.genesys.amphibian.client.model.RowMetadata
- JSON_PROPERTY_MIN - Static variable in class org.genesys.amphibian.client.model.Bin
- JSON_PROPERTY_MIN - Static variable in class org.genesys.amphibian.client.model.ObservationHistogram
- JSON_PROPERTY_MIN - Static variable in class org.genesys.amphibian.client.model.ValidateNumericRequest
- JSON_PROPERTY_MODIFIED_DATE - Static variable in class org.genesys.amphibian.client.model.DatasetTable
- JSON_PROPERTY_MODIFIED_DATE - Static variable in class org.genesys.amphibian.client.model.Preview
- JSON_PROPERTY_NAME - Static variable in class org.genesys.amphibian.client.model.Preview
- JSON_PROPERTY_NAME - Static variable in class org.genesys.amphibian.client.model.PreviewSheet
- JSON_PROPERTY_NULL_VALUES - Static variable in class org.genesys.amphibian.client.model.ObservationChart
- JSON_PROPERTY_NULL_VALUES - Static variable in class org.genesys.amphibian.client.model.ObservationHistogram
- JSON_PROPERTY_NUMBER_OF_DISTINCT - Static variable in class org.genesys.amphibian.client.model.StatisticsData
- JSON_PROPERTY_NUMBER_OF_NULL - Static variable in class org.genesys.amphibian.client.model.Descriptor
- JSON_PROPERTY_NUMBER_OF_NULL - Static variable in class org.genesys.amphibian.client.model.StatisticsData
- JSON_PROPERTY_OBSERVATIONS - Static variable in class org.genesys.amphibian.client.model.TraitDataFilter
- JSON_PROPERTY_R - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_R - Static variable in class org.genesys.amphibian.client.model.RowMetadata
- JSON_PROPERTY_REFERENCE_UUID - Static variable in class org.genesys.amphibian.client.model.Preview
- JSON_PROPERTY_REG_EXP - Static variable in class org.genesys.amphibian.client.model.ValidateTextRequest
- JSON_PROPERTY_ROW_COUNT - Static variable in class org.genesys.amphibian.client.model.PreviewSheet
- JSON_PROPERTY_ROWS - Static variable in class org.genesys.amphibian.client.model.LongToWide
- JSON_PROPERTY_S - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_S - Static variable in class org.genesys.amphibian.client.model.RowMetadata
- JSON_PROPERTY_SHEET - Static variable in class org.genesys.amphibian.client.model.LongToWide
- JSON_PROPERTY_SHEETS - Static variable in class org.genesys.amphibian.client.model.Preview
- JSON_PROPERTY_SOURCES - Static variable in class org.genesys.amphibian.client.model.DatasetTableExtras
- JSON_PROPERTY_START_ROW - Static variable in class org.genesys.amphibian.client.model.LongToWide
- JSON_PROPERTY_STATE - Static variable in class org.genesys.amphibian.client.model.DatasetTableExtras
- JSON_PROPERTY_STATE - Static variable in class org.genesys.amphibian.client.model.Preview
- JSON_PROPERTY_STREAM_UUID - Static variable in class org.genesys.amphibian.client.model.ObservationStreamResponse
- JSON_PROPERTY_SW - Static variable in class org.genesys.amphibian.client.model.FieldFilter
- JSON_PROPERTY_TARGET_TYPE - Static variable in class org.genesys.amphibian.client.model.IngestColumnRequest
- JSON_PROPERTY_TITLE - Static variable in class org.genesys.amphibian.client.model.DatasetTable
- JSON_PROPERTY_TO - Static variable in class org.genesys.amphibian.client.model.ValueMapping
- JSON_PROPERTY_TOTAL_ELEMENTS - Static variable in class org.genesys.amphibian.client.model.ObservationStreamResponse
- JSON_PROPERTY_TOTAL_VALUES - Static variable in class org.genesys.amphibian.client.model.StatisticsData
- JSON_PROPERTY_TYPE - Static variable in class org.genesys.amphibian.client.model.FieldFilter
- JSON_PROPERTY_UNIQUE - Static variable in class org.genesys.amphibian.client.model.Descriptor
- JSON_PROPERTY_V - Static variable in class org.genesys.amphibian.client.model.ObservationRegistration
- JSON_PROPERTY_VALUE - Static variable in class org.genesys.amphibian.client.model.Bin
- JSON_PROPERTY_VALUE - Static variable in class org.genesys.amphibian.client.model.Category
- JSON_PROPERTY_VALUE - Static variable in class org.genesys.amphibian.client.model.LongToWide
- JSON_PROPERTY_VALUE_MAPPING - Static variable in class org.genesys.amphibian.client.model.IngestColumnRequest
- JSON_PROPERTY_VALUE_MAPPING - Static variable in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- JSON_PROPERTY_VALUE_MAPPING - Static variable in class org.genesys.amphibian.client.model.ValidateNumericRequest
- JSON_PROPERTY_VALUE_MAPPING - Static variable in class org.genesys.amphibian.client.model.ValidateTextRequest
- JSON_PROPERTY_VERSION - Static variable in class org.genesys.amphibian.client.model.DatasetTable
- JSON_PROPERTY_VERSION - Static variable in class org.genesys.amphibian.client.model.Preview
K
- key(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
L
- le(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
- localizedError(String) - Method in class org.genesys.amphibian.client.model.ApiErrorException
- longToWide(UUID, LongToWide) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Generate a sheet with wide data from long data
- LongToWide - Class in org.genesys.amphibian.client.model
-
LongToWide
- LongToWide() - Constructor for class org.genesys.amphibian.client.model.LongToWide
- longToWideWithHttpInfo(UUID, LongToWide) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Generate a sheet with wide data from long data
- lt(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
M
- max(Double) - Method in class org.genesys.amphibian.client.model.Bin
- max(Double) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- max(Double) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- maxLength(Integer) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- meta(Map<String, Object>) - Method in class org.genesys.amphibian.client.model.RowMetadata
- min(Double) - Method in class org.genesys.amphibian.client.model.Bin
- min(Double) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- min(Double) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- modifiedDate(Date) - Method in class org.genesys.amphibian.client.model.DatasetTable
- modifiedDate(Date) - Method in class org.genesys.amphibian.client.model.Preview
- MULTI - org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
N
- name(String) - Method in class org.genesys.amphibian.client.model.Preview
- name(String) - Method in class org.genesys.amphibian.client.model.PreviewSheet
- nullValues(Long) - Method in class org.genesys.amphibian.client.model.ObservationChart
- nullValues(Long) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- NUMBER - org.genesys.amphibian.client.model.FieldFilter.TypeEnum
- numberOfDistinct(Integer) - Method in class org.genesys.amphibian.client.model.StatisticsData
- numberOfNull(Long) - Method in class org.genesys.amphibian.client.model.Descriptor
- numberOfNull(Long) - Method in class org.genesys.amphibian.client.model.StatisticsData
- NUMERIC - org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
O
- ObservationChart - Class in org.genesys.amphibian.client.model
-
ObservationChart
- ObservationChart() - Constructor for class org.genesys.amphibian.client.model.ObservationChart
- ObservationHistogram - Class in org.genesys.amphibian.client.model
-
ObservationHistogram
- ObservationHistogram() - Constructor for class org.genesys.amphibian.client.model.ObservationHistogram
- ObservationRegistration - Class in org.genesys.amphibian.client.model
-
New accession observations
- ObservationRegistration() - Constructor for class org.genesys.amphibian.client.model.ObservationRegistration
- observations(Map<String, FieldFilter>) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
- ObservationStreamResponse - Class in org.genesys.amphibian.client.model
-
ObservationStreamResponse
- ObservationStreamResponse() - Constructor for class org.genesys.amphibian.client.model.ObservationStreamResponse
- org.genesys.amphibian.client.api - package org.genesys.amphibian.client.api
- org.genesys.amphibian.client.invoker - package org.genesys.amphibian.client.invoker
- org.genesys.amphibian.client.invoker.auth - package org.genesys.amphibian.client.invoker.auth
- org.genesys.amphibian.client.model - package org.genesys.amphibian.client.model
P
- parameterToMultiValueMap(ApiClient.CollectionFormat, String, Object) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Converts a parameter to a
MultiValueMapfor use in REST requests - parameterToString(Object) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Format the given parameter object into string.
- parse(String) - Method in class org.genesys.amphibian.client.invoker.RFC3339DateFormat
- parse(String, ParsePosition) - Method in class org.genesys.amphibian.client.invoker.RFC3339DateFormat
- parseDate(String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Parse the given string into Date object.
- PIPES - org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
- Preview - Class in org.genesys.amphibian.client.model
-
Preview
- Preview() - Constructor for class org.genesys.amphibian.client.model.Preview
- Preview.StateEnum - Enum in org.genesys.amphibian.client.model
-
Gets or Sets state
- PreviewApi - Class in org.genesys.amphibian.client.api
- PreviewApi() - Constructor for class org.genesys.amphibian.client.api.PreviewApi
- PreviewApi(ApiClient) - Constructor for class org.genesys.amphibian.client.api.PreviewApi
- PreviewDataFilter - Class in org.genesys.amphibian.client.model
-
Data filters
- PreviewDataFilter() - Constructor for class org.genesys.amphibian.client.model.PreviewDataFilter
- PreviewSheet - Class in org.genesys.amphibian.client.model
-
PreviewSheet
- PreviewSheet() - Constructor for class org.genesys.amphibian.client.model.PreviewSheet
- putCategoriesItem(String, List<Object>) - Method in class org.genesys.amphibian.client.model.HeatMap
- putColumnsItem(String, Map<String, Object>) - Method in class org.genesys.amphibian.client.model.DatasetTable
- putColumnsItem(String, Map<String, Object>) - Method in class org.genesys.amphibian.client.model.DataSource
- putDescriptorSourcesItem(String, Set<UUID>) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
- putFieldsItem(String, FieldFilter) - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
- putHeatMapItem(String, Map<String, Integer>) - Method in class org.genesys.amphibian.client.model.HeatMap
- putMetaItem(String, Object) - Method in class org.genesys.amphibian.client.model.RowMetadata
- putObservationsItem(String, FieldFilter) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
- putSourcesItem(String, Map<String, DataSource>) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
R
- r(Integer) - Method in class org.genesys.amphibian.client.model.RowMetadata
- r(Long) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- READING - org.genesys.amphibian.client.model.Preview.StateEnum
- READY - org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
- READY - org.genesys.amphibian.client.model.Preview.StateEnum
- referenceUuid(UUID) - Method in class org.genesys.amphibian.client.model.Preview
- regExp(String) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- removeDescriptorData(String, UUID) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Remove descriptor data from table
- removeDescriptorDataWithHttpInfo(String, UUID) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Remove descriptor data from table
- ResponsePage<T> - Class in org.genesys.amphibian.client.model
- ResponsePage(List<T>, int, int, Long, JsonNode, boolean, int, JsonNode, boolean, int) - Constructor for class org.genesys.amphibian.client.model.ResponsePage
- RFC3339DateFormat - Class in org.genesys.amphibian.client.invoker
- RFC3339DateFormat() - Constructor for class org.genesys.amphibian.client.invoker.RFC3339DateFormat
- rowCount(Integer) - Method in class org.genesys.amphibian.client.model.PreviewSheet
- RowMetadata - Class in org.genesys.amphibian.client.model
-
RowMetadata
- RowMetadata() - Constructor for class org.genesys.amphibian.client.model.RowMetadata
- rows(List<String>) - Method in class org.genesys.amphibian.client.model.LongToWide
S
- s(Integer) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- s(Integer) - Method in class org.genesys.amphibian.client.model.RowMetadata
- selectBody(Object, MultiValueMap<String, Object>, MediaType) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Select the body to use for the request
- selectHeaderAccept(String[]) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Select the Accept header's value from the given accepts array: if JSON exists in the given array, use it; otherwise use all of them (joining into a string)
- selectHeaderContentType(String[]) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Select the Content-Type header's value from the given array: if JSON exists in the given array, use it; otherwise use the first one of the array.
- ServerConfiguration - Class in org.genesys.amphibian.client.invoker
-
Representing a Server configuration.
- ServerConfiguration(String, String, Map<String, ServerVariable>) - Constructor for class org.genesys.amphibian.client.invoker.ServerConfiguration
- ServerVariable - Class in org.genesys.amphibian.client.invoker
-
Representing a Server Variable for server URL template substitution.
- ServerVariable(String, String, HashSet<String>) - Constructor for class org.genesys.amphibian.client.invoker.ServerVariable
- setAcceptedCategories(List<String>) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- setAccession(Set<UUID>) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
- setAccession(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setAccessionNumber(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setApiClient(ApiClient) - Method in class org.genesys.amphibian.client.api.DatasetsApi
- setApiClient(ApiClient) - Method in class org.genesys.amphibian.client.api.InfoApi
- setApiClient(ApiClient) - Method in class org.genesys.amphibian.client.api.PreviewApi
- setApiKey(String) - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
- setApiKeyPrefix(String) - Method in class org.genesys.amphibian.client.invoker.auth.ApiKeyAuth
- setArraySeparator(String) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
- setArraySeparator(String) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- setArraySeparator(String) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- setArraySeparator(String) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- setBasePath(String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Set the base path, which should include the host
- setBearerToken(String) - Method in class org.genesys.amphibian.client.invoker.auth.HttpBearerAuth
- setBins(List<Bin>) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- setC(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setCategories(List<Category>) - Method in class org.genesys.amphibian.client.model.ObservationChart
- setCategories(Map<String, List<Object>>) - Method in class org.genesys.amphibian.client.model.HeatMap
- setCollection(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
- setColumn(String) - Method in class org.genesys.amphibian.client.model.LongToWide
- setColumnName(String) - Method in class org.genesys.amphibian.client.model.Descriptor
- setColumns(Map<String, Map<String, Object>>) - Method in class org.genesys.amphibian.client.model.DatasetTable
- setColumns(Map<String, Map<String, Object>>) - Method in class org.genesys.amphibian.client.model.DataSource
- setContains(Set<String>) - Method in class org.genesys.amphibian.client.model.FieldFilter
- setContentLength(Long) - Method in class org.genesys.amphibian.client.model.Preview
- setContentType(String) - Method in class org.genesys.amphibian.client.model.IngestRequest
- setContext(Object) - Method in class org.genesys.amphibian.client.model.ApiErrorException
- setCount(Long) - Method in class org.genesys.amphibian.client.model.Category
- setCreatedDate(Date) - Method in class org.genesys.amphibian.client.model.DatasetTable
- setCreatedDate(Date) - Method in class org.genesys.amphibian.client.model.Preview
- setD(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setData(Boolean) - Method in class org.genesys.amphibian.client.model.DataSource
- setData(List<Object>) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
- setDataType(Descriptor.DataTypeEnum) - Method in class org.genesys.amphibian.client.model.Descriptor
- setDateFormat(DateFormat) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Set the date format used to parse/format date parameters.
- setDebugging(boolean) - Method in class org.genesys.amphibian.client.invoker.ApiClient
- setDescriptor(UUID) - Method in class org.genesys.amphibian.client.model.ObservationChart
- setDescriptor(UUID) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- setDescriptor(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setDescriptors(List<Descriptor>) - Method in class org.genesys.amphibian.client.model.PreviewSheet
- setDescriptorSources(Map<String, Set<UUID>>) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
- setDistinctValues(Set<Object>) - Method in class org.genesys.amphibian.client.model.StatisticsData
- setDoi(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setEncoding(String) - Method in class org.genesys.amphibian.client.model.IngestRequest
- setEq(Set<Object>) - Method in class org.genesys.amphibian.client.model.FieldFilter
- setError(String) - Method in class org.genesys.amphibian.client.model.ApiErrorException
- setError(String) - Method in class org.genesys.amphibian.client.model.Preview
- setErrors(List<String>) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setExamples(Set<Object>) - Method in class org.genesys.amphibian.client.model.Descriptor
- setExpires(Date) - Method in class org.genesys.amphibian.client.model.IngestRequest
- setExpires(Date) - Method in class org.genesys.amphibian.client.model.Preview
- setExtras(DatasetTableExtras) - Method in class org.genesys.amphibian.client.model.DatasetTable
- setF(UUID) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setField(String) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
- setField(String) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- setField(String) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- setField(String) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- setFields(Map<String, FieldFilter>) - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
- setFile(File) - Method in class org.genesys.amphibian.client.model.IngestRequest
- setFirstRow(Long) - Method in class org.genesys.amphibian.client.model.DataSource
- setFrom(Object) - Method in class org.genesys.amphibian.client.model.ValueMapping
- setGe(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
- setGenus(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setGt(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
- setHeatMap(Map<String, Map<String, Integer>>) - Method in class org.genesys.amphibian.client.model.HeatMap
- setId(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
- setId(String) - Method in class org.genesys.amphibian.client.model.Preview
- setIndex(Integer) - Method in class org.genesys.amphibian.client.model.PreviewSheet
- setInstituteCode(String) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setIntegerOnly(Boolean) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- setIsAccessionMapped(Boolean) - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
- setKey(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
- setLe(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
- setLocalizedError(String) - Method in class org.genesys.amphibian.client.model.ApiErrorException
- setLt(Object) - Method in class org.genesys.amphibian.client.model.FieldFilter
- setMax(Double) - Method in class org.genesys.amphibian.client.model.Bin
- setMax(Double) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- setMax(Double) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- setMaxLength(Integer) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- setMeta(Map<String, Object>) - Method in class org.genesys.amphibian.client.model.RowMetadata
- setMin(Double) - Method in class org.genesys.amphibian.client.model.Bin
- setMin(Double) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- setMin(Double) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- setModifiedDate(Date) - Method in class org.genesys.amphibian.client.model.DatasetTable
- setModifiedDate(Date) - Method in class org.genesys.amphibian.client.model.Preview
- setName(String) - Method in class org.genesys.amphibian.client.model.Preview
- setName(String) - Method in class org.genesys.amphibian.client.model.PreviewSheet
- setNullValues(Long) - Method in class org.genesys.amphibian.client.model.ObservationChart
- setNullValues(Long) - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- setNumberOfDistinct(Integer) - Method in class org.genesys.amphibian.client.model.StatisticsData
- setNumberOfNull(Long) - Method in class org.genesys.amphibian.client.model.Descriptor
- setNumberOfNull(Long) - Method in class org.genesys.amphibian.client.model.StatisticsData
- setObservations(Map<String, FieldFilter>) - Method in class org.genesys.amphibian.client.model.TraitDataFilter
- setPassword(String) - Method in class org.genesys.amphibian.client.invoker.auth.HttpBasicAuth
- setR(Integer) - Method in class org.genesys.amphibian.client.model.RowMetadata
- setR(Long) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setReferenceUuid(UUID) - Method in class org.genesys.amphibian.client.model.Preview
- setRegExp(String) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- setRowCount(Integer) - Method in class org.genesys.amphibian.client.model.PreviewSheet
- setRows(List<String>) - Method in class org.genesys.amphibian.client.model.LongToWide
- setS(Integer) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setS(Integer) - Method in class org.genesys.amphibian.client.model.RowMetadata
- setSheet(Integer) - Method in class org.genesys.amphibian.client.model.LongToWide
- setSheets(List<PreviewSheet>) - Method in class org.genesys.amphibian.client.model.Preview
- setSources(Map<String, Map<String, DataSource>>) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
- setStartRow(Integer) - Method in class org.genesys.amphibian.client.model.LongToWide
- setState(DatasetTableExtras.StateEnum) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
- setState(Preview.StateEnum) - Method in class org.genesys.amphibian.client.model.Preview
- setStreamUuid(UUID) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
- setSw(Set<String>) - Method in class org.genesys.amphibian.client.model.FieldFilter
- setTargetType(IngestColumnRequest.TargetTypeEnum) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
- setTitle(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
- setTo(Object) - Method in class org.genesys.amphibian.client.model.ValueMapping
- setTotalElements(Long) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
- setTotalValues(Long) - Method in class org.genesys.amphibian.client.model.StatisticsData
- setType(FieldFilter.TypeEnum) - Method in class org.genesys.amphibian.client.model.FieldFilter
- setUnique(Boolean) - Method in class org.genesys.amphibian.client.model.Descriptor
- setUserAgent(String) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Set the User-Agent header's value (by adding to the default header map).
- setUsername(String) - Method in class org.genesys.amphibian.client.invoker.auth.HttpBasicAuth
- setV(List<Object>) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- setValue(Long) - Method in class org.genesys.amphibian.client.model.Bin
- setValue(String) - Method in class org.genesys.amphibian.client.model.Category
- setValue(String) - Method in class org.genesys.amphibian.client.model.LongToWide
- setValueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
- setValueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- setValueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- setValueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- setVersion(Long) - Method in class org.genesys.amphibian.client.model.DatasetTable
- setVersion(Long) - Method in class org.genesys.amphibian.client.model.Preview
- sheet(Integer) - Method in class org.genesys.amphibian.client.model.LongToWide
- sheets(List<PreviewSheet>) - Method in class org.genesys.amphibian.client.model.Preview
- sources(Map<String, Map<String, DataSource>>) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
- SSV - org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
- startRow(Integer) - Method in class org.genesys.amphibian.client.model.LongToWide
- state(DatasetTableExtras.StateEnum) - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
- state(Preview.StateEnum) - Method in class org.genesys.amphibian.client.model.Preview
- StatisticsData - Class in org.genesys.amphibian.client.model
-
StatisticsData
- StatisticsData() - Constructor for class org.genesys.amphibian.client.model.StatisticsData
- streamObservations(String, List<UUID>, Integer, UUID, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Get accession observations from this dataset using cursor
- streamObservationsWithHttpInfo(String, List<UUID>, Integer, UUID, TraitDataFilter) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Get accession observations from this dataset using cursor
- streamUuid(UUID) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
- STRING - org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
- sw(Set<String>) - Method in class org.genesys.amphibian.client.model.FieldFilter
T
- targetType(IngestColumnRequest.TargetTypeEnum) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
- TEXT - org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
- TEXT - org.genesys.amphibian.client.model.FieldFilter.TypeEnum
- title(String) - Method in class org.genesys.amphibian.client.model.DatasetTable
- to(Object) - Method in class org.genesys.amphibian.client.model.ValueMapping
- toString() - Method in class org.genesys.amphibian.client.model.ApiErrorException
- toString() - Method in class org.genesys.amphibian.client.model.Bin
- toString() - Method in class org.genesys.amphibian.client.model.Category
- toString() - Method in class org.genesys.amphibian.client.model.DatasetTable
- toString() - Method in enum org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
- toString() - Method in class org.genesys.amphibian.client.model.DatasetTableExtras
- toString() - Method in class org.genesys.amphibian.client.model.DataSource
- toString() - Method in enum org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
- toString() - Method in class org.genesys.amphibian.client.model.Descriptor
- toString() - Method in class org.genesys.amphibian.client.model.FieldFilter
- toString() - Method in enum org.genesys.amphibian.client.model.FieldFilter.TypeEnum
- toString() - Method in class org.genesys.amphibian.client.model.HeatMap
- toString() - Method in enum org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
- toString() - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
- toString() - Method in class org.genesys.amphibian.client.model.IngestRequest
- toString() - Method in class org.genesys.amphibian.client.model.LongToWide
- toString() - Method in class org.genesys.amphibian.client.model.ObservationChart
- toString() - Method in class org.genesys.amphibian.client.model.ObservationHistogram
- toString() - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- toString() - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
- toString() - Method in enum org.genesys.amphibian.client.model.Preview.StateEnum
- toString() - Method in class org.genesys.amphibian.client.model.Preview
- toString() - Method in class org.genesys.amphibian.client.model.PreviewDataFilter
- toString() - Method in class org.genesys.amphibian.client.model.PreviewSheet
- toString() - Method in class org.genesys.amphibian.client.model.RowMetadata
- toString() - Method in class org.genesys.amphibian.client.model.StatisticsData
- toString() - Method in class org.genesys.amphibian.client.model.TraitDataFilter
- toString() - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- toString() - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- toString() - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- toString() - Method in class org.genesys.amphibian.client.model.ValueMapping
- totalElements(Long) - Method in class org.genesys.amphibian.client.model.ObservationStreamResponse
- totalValues(Long) - Method in class org.genesys.amphibian.client.model.StatisticsData
- TraitDataFilter - Class in org.genesys.amphibian.client.model
-
Data filters
- TraitDataFilter() - Constructor for class org.genesys.amphibian.client.model.TraitDataFilter
- TSV - org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
- type(FieldFilter.TypeEnum) - Method in class org.genesys.amphibian.client.model.FieldFilter
- TYPE_DATE - Static variable in class org.genesys.amphibian.client.model.FieldFilter
- TYPE_NUMBER - Static variable in class org.genesys.amphibian.client.model.FieldFilter
- TYPE_TEXT - Static variable in class org.genesys.amphibian.client.model.FieldFilter
U
- unique(Boolean) - Method in class org.genesys.amphibian.client.model.Descriptor
- updateParamsForAuth(String[], MultiValueMap<String, String>, HttpHeaders, MultiValueMap<String, String>) - Method in class org.genesys.amphibian.client.invoker.ApiClient
-
Update query and header parameters based on authentication settings.
- updateTable(DatasetTable) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Update table
- updateTableWithHttpInfo(DatasetTable) - Method in class org.genesys.amphibian.client.api.DatasetsApi
-
Update table
- UPLOADED - org.genesys.amphibian.client.model.Preview.StateEnum
- URL - Variable in class org.genesys.amphibian.client.invoker.ServerConfiguration
- URL() - Method in class org.genesys.amphibian.client.invoker.ServerConfiguration
-
Format URL template using default server variables.
- URL(Map<String, String>) - Method in class org.genesys.amphibian.client.invoker.ServerConfiguration
-
Format URL template using given variables.
V
- v(List<Object>) - Method in class org.genesys.amphibian.client.model.ObservationRegistration
- validateCategorical(UUID, Integer, Long, ValidateCategoricalRequest) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Assert that field values correspond to constraints for CATEGORICAL data
- ValidateCategoricalRequest - Class in org.genesys.amphibian.client.model
-
ValidateCategoricalRequest
- ValidateCategoricalRequest() - Constructor for class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- validateCategoricalWithHttpInfo(UUID, Integer, Long, ValidateCategoricalRequest) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Assert that field values correspond to constraints for CATEGORICAL data
- validateNumeric(UUID, Integer, Long, ValidateNumericRequest) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Assert that field values correspond to constraints for TEXT data
- ValidateNumericRequest - Class in org.genesys.amphibian.client.model
-
ValidateNumericRequest
- ValidateNumericRequest() - Constructor for class org.genesys.amphibian.client.model.ValidateNumericRequest
- validateNumericWithHttpInfo(UUID, Integer, Long, ValidateNumericRequest) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Assert that field values correspond to constraints for TEXT data
- validateText(UUID, Integer, Long, ValidateTextRequest) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Assert that field values correspond to constraints for TEXT data
- ValidateTextRequest - Class in org.genesys.amphibian.client.model
-
ValidateTextRequest
- ValidateTextRequest() - Constructor for class org.genesys.amphibian.client.model.ValidateTextRequest
- validateTextWithHttpInfo(UUID, Integer, Long, ValidateTextRequest) - Method in class org.genesys.amphibian.client.api.PreviewApi
-
Assert that field values correspond to constraints for TEXT data
- value(Long) - Method in class org.genesys.amphibian.client.model.Bin
- value(String) - Method in class org.genesys.amphibian.client.model.Category
- value(String) - Method in class org.genesys.amphibian.client.model.LongToWide
- valueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.IngestColumnRequest
- valueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.ValidateCategoricalRequest
- valueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.ValidateNumericRequest
- valueMapping(List<ValueMapping>) - Method in class org.genesys.amphibian.client.model.ValidateTextRequest
- ValueMapping - Class in org.genesys.amphibian.client.model
-
ValueMapping
- ValueMapping() - Constructor for class org.genesys.amphibian.client.model.ValueMapping
- valueOf(String) - Static method in enum org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum org.genesys.amphibian.client.model.FieldFilter.TypeEnum
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum org.genesys.amphibian.client.model.Preview.StateEnum
-
Returns the enum constant of this type with the specified name.
- values() - Static method in enum org.genesys.amphibian.client.invoker.ApiClient.CollectionFormat
-
Returns an array containing the constants of this enum type, in the order they are declared.
- values() - Static method in enum org.genesys.amphibian.client.model.DatasetTableExtras.StateEnum
-
Returns an array containing the constants of this enum type, in the order they are declared.
- values() - Static method in enum org.genesys.amphibian.client.model.Descriptor.DataTypeEnum
-
Returns an array containing the constants of this enum type, in the order they are declared.
- values() - Static method in enum org.genesys.amphibian.client.model.FieldFilter.TypeEnum
-
Returns an array containing the constants of this enum type, in the order they are declared.
- values() - Static method in enum org.genesys.amphibian.client.model.IngestColumnRequest.TargetTypeEnum
-
Returns an array containing the constants of this enum type, in the order they are declared.
- values() - Static method in enum org.genesys.amphibian.client.model.Preview.StateEnum
-
Returns an array containing the constants of this enum type, in the order they are declared.
- variables - Variable in class org.genesys.amphibian.client.invoker.ServerConfiguration
- version(Long) - Method in class org.genesys.amphibian.client.model.DatasetTable
- version(Long) - Method in class org.genesys.amphibian.client.model.Preview
_
- _file(File) - Method in class org.genesys.amphibian.client.model.IngestRequest
All Classes All Packages