org.genesys2.gringlobal.taxonomy.component

Class TaxonomyChecker

java.lang.Object

org.genesys2.gringlobal.taxonomy.component.TaxonomyChecker

public class TaxonomyChecker
extends Object

Suggest fixes to scientific names based on an in-memory list of valid taxonomies.

Constructor Summary

Constructors

Constructor and Description
TaxonomyChecker()

Method Summary

Modifier and Type	Method and Description
String	getSpeciesAuthority(String genus, String species) Return species authority for the genus + species.
void	setTaxonomyDatabase(TaxonomyDatabase database) Sets the taxonomy database.
List<String>	suggestGenus(String genus, int maxSize) Find suggestions for GENUS.
List<String>	suggestSpecies(String genus, String species, int maxSize) Find suggestions for SPECIES.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

TaxonomyChecker

public TaxonomyChecker()

Method Detail

setTaxonomyDatabase

public void setTaxonomyDatabase(TaxonomyDatabase database)

Sets the taxonomy database.

Parameters:

database - the new taxonomy database

suggestGenus

public List<String> suggestGenus(String genus,
                                 int maxSize)

Find suggestions for GENUS.

Parameters:

genus - the genus

maxSize - the max size

Returns:

suggested fixes for genus or empty list when genus is fine or when there are no suggestions.

suggestSpecies

public List<String> suggestSpecies(String genus,
                                   String species,
                                   int maxSize)

Find suggestions for SPECIES.

Parameters:

genus - the genus

species - the species

maxSize - TODO

Returns:

suggested fixes for genus or empty list if species is fine or when there are no suggestions.

getSpeciesAuthority

public String getSpeciesAuthority(String genus,
                                  String species)

Return species authority for the genus + species.

Parameters:

genus - the genus

species - the species

Returns:

species authority if there's one matching record in the database