Package org.intermine.model.bio

Class OrganismShadow

  • All Implemented Interfaces:
    Organism, org.intermine.model.FastPathObject, org.intermine.model.InterMineFastPathObject, org.intermine.model.InterMineObject, org.intermine.model.ShadowClass
    public class OrganismShadow
extends java.lang.Object
implements Organism, org.intermine.model.ShadowClass

    • Field Detail

      • shadowOf

        public static final java.lang.Class<Organism> shadowOf

      • species

        protected java.lang.String species

      • genus

        protected java.lang.String genus

      • taxonId

        protected java.lang.String taxonId

      • name

        protected java.lang.String name

      • commonName

        protected java.lang.String commonName

      • shortName

        protected java.lang.String shortName

      • strains

        protected java.util.Set<Strain> strains

      • id

        protected java.lang.Integer id

    • Constructor Detail

      • OrganismShadow

        public OrganismShadow()

    • Method Detail

      • getSpecies

        public java.lang.String getSpecies()
        Specified by:
        getSpecies in interface Organism

      • setSpecies

        public void setSpecies​(java.lang.String species)
        Specified by:
        setSpecies in interface Organism

      • getGenus

        public java.lang.String getGenus()
        Specified by:
        getGenus in interface Organism

      • setGenus

        public void setGenus​(java.lang.String genus)
        Specified by:
        setGenus in interface Organism

      • getTaxonId

        public java.lang.String getTaxonId()
        Specified by:
        getTaxonId in interface Organism

      • setTaxonId

        public void setTaxonId​(java.lang.String taxonId)
        Specified by:
        setTaxonId in interface Organism

      • getName

        public java.lang.String getName()
        Specified by:
        getName in interface Organism

      • setName

        public void setName​(java.lang.String name)
        Specified by:
        setName in interface Organism

      • getCommonName

        public java.lang.String getCommonName()
        Specified by:
        getCommonName in interface Organism

      • setCommonName

        public void setCommonName​(java.lang.String commonName)
        Specified by:
        setCommonName in interface Organism

      • getShortName

        public java.lang.String getShortName()
        Specified by:
        getShortName in interface Organism

      • setShortName

        public void setShortName​(java.lang.String shortName)
        Specified by:
        setShortName in interface Organism

      • setStrains

        public void setStrains​(java.util.Set<Strain> strains)
        Specified by:
        setStrains in interface Organism

      • getId

        public java.lang.Integer getId()
        Specified by:
        getId in interface org.intermine.model.InterMineFastPathObject
        Specified by:
        getId in interface org.intermine.model.InterMineObject

      • setId

        public void setId​(java.lang.Integer id)
        Specified by:
        setId in interface org.intermine.model.InterMineFastPathObject
        Specified by:
        setId in interface org.intermine.model.InterMineObject

      • equals

        public boolean equals​(java.lang.Object o)
        Overrides:
        equals in class java.lang.Object

      • hashCode

        public int hashCode()
        Overrides:
        hashCode in class java.lang.Object

      • toString

        public java.lang.String toString()
        Overrides:
        toString in class java.lang.Object

      • getFieldValue

        public java.lang.Object getFieldValue​(java.lang.String fieldName)
                               throws java.lang.IllegalAccessException
        Specified by:
        getFieldValue in interface org.intermine.model.FastPathObject
        Throws:
        java.lang.IllegalAccessException

      • getFieldProxy

        public java.lang.Object getFieldProxy​(java.lang.String fieldName)
                               throws java.lang.IllegalAccessException
        Specified by:
        getFieldProxy in interface org.intermine.model.FastPathObject
        Throws:
        java.lang.IllegalAccessException

      • setFieldValue

        public void setFieldValue​(java.lang.String fieldName,
                          java.lang.Object value)
        Specified by:
        setFieldValue in interface org.intermine.model.FastPathObject

      • getFieldType

        public java.lang.Class<?> getFieldType​(java.lang.String fieldName)
        Specified by:
        getFieldType in interface org.intermine.model.FastPathObject

      • getoBJECT

        public org.intermine.model.StringConstructor getoBJECT()
        Specified by:
        getoBJECT in interface org.intermine.model.InterMineFastPathObject
        Specified by:
        getoBJECT in interface org.intermine.model.InterMineObject

      • setoBJECT

        public void setoBJECT​(java.lang.String notXml,
                      org.intermine.objectstore.ObjectStore os)
        Specified by:
        setoBJECT in interface org.intermine.model.InterMineObject

      • setoBJECT

        public void setoBJECT​(java.lang.String[] notXml,
                      org.intermine.objectstore.ObjectStore os)
        Specified by:
        setoBJECT in interface org.intermine.model.InterMineObject

      • addCollectionElement

        public void addCollectionElement​(java.lang.String fieldName,
                                 org.intermine.model.InterMineObject element)

      • getElementType

        public java.lang.Class<?> getElementType​(java.lang.String fieldName)
        Specified by:
        getElementType in interface org.intermine.model.InterMineFastPathObject
        Specified by:
        getElementType in interface org.intermine.model.InterMineObject