Package org.intermine.model.bio

Class HomologueShadow

java.lang.Object

org.intermine.model.bio.HomologueShadow

All Implemented Interfaces:

Homologue, org.intermine.model.FastPathObject, org.intermine.model.InterMineFastPathObject, org.intermine.model.InterMineObject, org.intermine.model.ShadowClass

public class HomologueShadow
extends java.lang.Object
implements Homologue, org.intermine.model.ShadowClass

Field Summary

Fields

Modifier and Type	Field	Description
protected java.util.Set<CrossReference>	crossReferences
protected java.util.Set<DataSet>	dataSets
protected java.util.Set<OrthologueEvidence>	evidence
protected org.intermine.model.InterMineObject	gene
protected org.intermine.model.InterMineObject	homologue
protected java.lang.Integer	id
static java.lang.Class<Homologue>	shadowOf
protected java.lang.String	type

Constructor Summary

Constructors

Constructor	Description
HomologueShadow()

Method Summary

Modifier and Type	Method	Description
void	addCollectionElement(java.lang.String fieldName, org.intermine.model.InterMineObject element)
void	addCrossReferences(CrossReference arg)
void	addDataSets(DataSet arg)
void	addEvidence(OrthologueEvidence arg)
boolean	equals(java.lang.Object o)
java.util.Set<CrossReference>	getCrossReferences()
java.util.Set<DataSet>	getDataSets()
java.lang.Class<?>	getElementType(java.lang.String fieldName)
java.util.Set<OrthologueEvidence>	getEvidence()
java.lang.Object	getFieldProxy(java.lang.String fieldName)
java.lang.Class<?>	getFieldType(java.lang.String fieldName)
java.lang.Object	getFieldValue(java.lang.String fieldName)
Gene	getGene()
Gene	getHomologue()
java.lang.Integer	getId()
org.intermine.model.StringConstructor	getoBJECT()
java.lang.String	getType()
int	hashCode()
org.intermine.model.InterMineObject	proxGetGene()
org.intermine.model.InterMineObject	proxGetHomologue()
void	proxyGene(org.intermine.objectstore.proxy.ProxyReference gene)
void	proxyHomologue(org.intermine.objectstore.proxy.ProxyReference homologue)
void	setCrossReferences(java.util.Set<CrossReference> crossReferences)
void	setDataSets(java.util.Set<DataSet> dataSets)
void	setEvidence(java.util.Set<OrthologueEvidence> evidence)
void	setFieldValue(java.lang.String fieldName, java.lang.Object value)
void	setGene(Gene gene)
void	setHomologue(Gene homologue)
void	setId(java.lang.Integer id)
void	setoBJECT(java.lang.String[] notXml, org.intermine.objectstore.ObjectStore os)
void	setoBJECT(java.lang.String notXml, org.intermine.objectstore.ObjectStore os)
void	setType(java.lang.String type)
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

shadowOf

public static final java.lang.Class<Homologue> shadowOf

type

protected java.lang.String type

gene

protected org.intermine.model.InterMineObject gene

homologue

protected org.intermine.model.InterMineObject homologue

dataSets

protected java.util.Set<DataSet> dataSets

evidence

protected java.util.Set<OrthologueEvidence> evidence

crossReferences

protected java.util.Set<CrossReference> crossReferences

id

protected java.lang.Integer id

Constructor Detail

HomologueShadow

public HomologueShadow()

Method Detail

getType

public java.lang.String getType()

Specified by:

getType in interface Homologue

setType

public void setType(java.lang.String type)

Specified by:

setType in interface Homologue

getGene

public Gene getGene()

Specified by:

getGene in interface Homologue

setGene

public void setGene(Gene gene)

Specified by:

setGene in interface Homologue

proxyGene

public void proxyGene(org.intermine.objectstore.proxy.ProxyReference gene)

Specified by:

proxyGene in interface Homologue

proxGetGene

public org.intermine.model.InterMineObject proxGetGene()

Specified by:

proxGetGene in interface Homologue

getHomologue

public Gene getHomologue()

Specified by:

getHomologue in interface Homologue

setHomologue

public void setHomologue(Gene homologue)

Specified by:

setHomologue in interface Homologue

proxyHomologue

public void proxyHomologue(org.intermine.objectstore.proxy.ProxyReference homologue)

Specified by:

proxyHomologue in interface Homologue

proxGetHomologue

public org.intermine.model.InterMineObject proxGetHomologue()

Specified by:

proxGetHomologue in interface Homologue

getDataSets

public java.util.Set<DataSet> getDataSets()

Specified by:

getDataSets in interface Homologue

setDataSets

public void setDataSets(java.util.Set<DataSet> dataSets)

Specified by:

setDataSets in interface Homologue

addDataSets

public void addDataSets(DataSet arg)

Specified by:

addDataSets in interface Homologue

getEvidence

public java.util.Set<OrthologueEvidence> getEvidence()

Specified by:

getEvidence in interface Homologue

setEvidence

public void setEvidence(java.util.Set<OrthologueEvidence> evidence)

Specified by:

setEvidence in interface Homologue

addEvidence

public void addEvidence(OrthologueEvidence arg)

Specified by:

addEvidence in interface Homologue

getCrossReferences

public java.util.Set<CrossReference> getCrossReferences()

Specified by:

getCrossReferences in interface Homologue

setCrossReferences

public void setCrossReferences(java.util.Set<CrossReference> crossReferences)

Specified by:

setCrossReferences in interface Homologue

addCrossReferences

public void addCrossReferences(CrossReference arg)

Specified by:

addCrossReferences in interface Homologue

getId

public java.lang.Integer getId()

Specified by:

getId in interface org.intermine.model.InterMineFastPathObject

Specified by:

getId in interface org.intermine.model.InterMineObject

setId

public void setId(java.lang.Integer id)

Specified by:

setId in interface org.intermine.model.InterMineFastPathObject

Specified by:

setId in interface org.intermine.model.InterMineObject

equals

public boolean equals(java.lang.Object o)

Overrides:

equals in class java.lang.Object

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

getFieldValue

public java.lang.Object getFieldValue(java.lang.String fieldName)
                               throws java.lang.IllegalAccessException

Specified by:

getFieldValue in interface org.intermine.model.FastPathObject

Throws:

java.lang.IllegalAccessException

getFieldProxy

public java.lang.Object getFieldProxy(java.lang.String fieldName)
                               throws java.lang.IllegalAccessException

Specified by:

getFieldProxy in interface org.intermine.model.FastPathObject

Throws:

java.lang.IllegalAccessException

setFieldValue

public void setFieldValue(java.lang.String fieldName,
                          java.lang.Object value)

Specified by:

setFieldValue in interface org.intermine.model.FastPathObject

getFieldType

public java.lang.Class<?> getFieldType(java.lang.String fieldName)

Specified by:

getFieldType in interface org.intermine.model.FastPathObject

getoBJECT

public org.intermine.model.StringConstructor getoBJECT()

Specified by:

getoBJECT in interface org.intermine.model.InterMineFastPathObject

Specified by:

getoBJECT in interface org.intermine.model.InterMineObject

setoBJECT

public void setoBJECT(java.lang.String notXml,
                      org.intermine.objectstore.ObjectStore os)

Specified by:

setoBJECT in interface org.intermine.model.InterMineObject

setoBJECT

public void setoBJECT(java.lang.String[] notXml,
                      org.intermine.objectstore.ObjectStore os)

Specified by:

setoBJECT in interface org.intermine.model.InterMineObject

addCollectionElement

public void addCollectionElement(java.lang.String fieldName,
                                 org.intermine.model.InterMineObject element)

getElementType

public java.lang.Class<?> getElementType(java.lang.String fieldName)

Specified by:

getElementType in interface org.intermine.model.InterMineFastPathObject

Specified by:

getElementType in interface org.intermine.model.InterMineObject