Package org.intermine.model.bio

Interface GeneFlankingRegion

All Superinterfaces:

Annotatable, BioEntity, org.intermine.model.FastPathObject, org.intermine.model.InterMineFastPathObject, org.intermine.model.InterMineObject, SequenceFeature

All Known Implementing Classes:

GeneFlankingRegionShadow

public interface GeneFlankingRegion
extends SequenceFeature

Method Summary

Modifier and Type	Method	Description
java.lang.String	getDirection()
java.lang.String	getDistance()
Gene	getGene()
java.lang.Boolean	getIncludeGene()
org.intermine.model.InterMineObject	proxGetGene()
void	proxyGene(org.intermine.objectstore.proxy.ProxyReference gene)
void	setDirection(java.lang.String direction)
void	setDistance(java.lang.String distance)
void	setGene(Gene gene)
void	setIncludeGene(java.lang.Boolean includeGene)

Methods inherited from interface org.intermine.model.bio.Annotatable

addOntologyAnnotations, addPublications, getOntologyAnnotations, getPrimaryIdentifier, getPublications, setOntologyAnnotations, setPrimaryIdentifier, setPublications

Methods inherited from interface org.intermine.model.bio.BioEntity

addCrossReferences, addDataSets, addLocatedFeatures, addLocations, addSynonyms, getCrossReferences, getDataSets, getLocatedFeatures, getLocations, getName, getOrganism, getSecondaryIdentifier, getSymbol, getSynonyms, proxGetOrganism, proxyOrganism, setCrossReferences, setDataSets, setLocatedFeatures, setLocations, setName, setOrganism, setSecondaryIdentifier, setSymbol, setSynonyms

Methods inherited from interface org.intermine.model.FastPathObject

getFieldProxy, getFieldType, getFieldValue, setFieldValue

Methods inherited from interface org.intermine.model.InterMineObject

getElementType, getId, getoBJECT, setId, setoBJECT, setoBJECT

Methods inherited from interface org.intermine.model.bio.SequenceFeature

addChildFeatures, addOverlappingFeatures, getChildFeatures, getChromosome, getChromosomeLocation, getLength, getOverlappingFeatures, getScore, getScoreType, getSequence, getSequenceOntologyTerm, getStrain, proxGetChromosome, proxGetChromosomeLocation, proxGetSequence, proxGetSequenceOntologyTerm, proxGetStrain, proxyChromosome, proxyChromosomeLocation, proxySequence, proxySequenceOntologyTerm, proxyStrain, setChildFeatures, setChromosome, setChromosomeLocation, setLength, setOverlappingFeatures, setScore, setScoreType, setSequence, setSequenceOntologyTerm, setStrain

Method Detail

getDirection

java.lang.String getDirection()

setDirection

void setDirection(java.lang.String direction)

getDistance

java.lang.String getDistance()

setDistance

void setDistance(java.lang.String distance)

getIncludeGene

java.lang.Boolean getIncludeGene()

setIncludeGene

void setIncludeGene(java.lang.Boolean includeGene)

getGene

Gene getGene()

setGene

void setGene(Gene gene)

proxyGene

void proxyGene(org.intermine.objectstore.proxy.ProxyReference gene)

proxGetGene

org.intermine.model.InterMineObject proxGetGene()