Package org.intermine.model.bio

Interface OntologyTerm

All Superinterfaces:

org.intermine.model.FastPathObject, org.intermine.model.InterMineFastPathObject, org.intermine.model.InterMineObject

All Known Subinterfaces:

SOTerm

All Known Implementing Classes:

OntologyTermShadow, SOTermShadow

public interface OntologyTerm
extends org.intermine.model.InterMineObject

Method Summary

Modifier and Type	Method	Description
void	addCrossReferences(OntologyTerm arg)
void	addDataSets(DataSet arg)
void	addOntologyAnnotations(OntologyAnnotation arg)
void	addParents(OntologyTerm arg)
void	addRelations(OntologyRelation arg)
void	addSynonyms(OntologyTermSynonym arg)
java.util.Set<OntologyTerm>	getCrossReferences()
java.util.Set<DataSet>	getDataSets()
java.lang.String	getDescription()
java.lang.String	getIdentifier()
java.lang.String	getName()
java.lang.String	getNamespace()
java.lang.Boolean	getObsolete()
Ontology	getOntology()
java.util.Set<OntologyAnnotation>	getOntologyAnnotations()
java.util.Set<OntologyTerm>	getParents()
java.util.Set<OntologyRelation>	getRelations()
java.util.Set<OntologyTermSynonym>	getSynonyms()
org.intermine.model.InterMineObject	proxGetOntology()
void	proxyOntology(org.intermine.objectstore.proxy.ProxyReference ontology)
void	setCrossReferences(java.util.Set<OntologyTerm> crossReferences)
void	setDataSets(java.util.Set<DataSet> dataSets)
void	setDescription(java.lang.String description)
void	setIdentifier(java.lang.String identifier)
void	setName(java.lang.String name)
void	setNamespace(java.lang.String namespace)
void	setObsolete(java.lang.Boolean obsolete)
void	setOntology(Ontology ontology)
void	setOntologyAnnotations(java.util.Set<OntologyAnnotation> ontologyAnnotations)
void	setParents(java.util.Set<OntologyTerm> parents)
void	setRelations(java.util.Set<OntologyRelation> relations)
void	setSynonyms(java.util.Set<OntologyTermSynonym> synonyms)

Methods inherited from interface org.intermine.model.FastPathObject

getFieldProxy, getFieldType, getFieldValue, setFieldValue

Methods inherited from interface org.intermine.model.InterMineObject

getElementType, getId, getoBJECT, setId, setoBJECT, setoBJECT

Method Detail

getIdentifier

java.lang.String getIdentifier()

setIdentifier

void setIdentifier(java.lang.String identifier)

getDescription

java.lang.String getDescription()

setDescription

void setDescription(java.lang.String description)

getObsolete

java.lang.Boolean getObsolete()

setObsolete

void setObsolete(java.lang.Boolean obsolete)

getName

java.lang.String getName()

setName

void setName(java.lang.String name)

getNamespace

java.lang.String getNamespace()

setNamespace

void setNamespace(java.lang.String namespace)

getOntology

Ontology getOntology()

setOntology

void setOntology(Ontology ontology)

proxyOntology

void proxyOntology(org.intermine.objectstore.proxy.ProxyReference ontology)

proxGetOntology

org.intermine.model.InterMineObject proxGetOntology()

getRelations

java.util.Set<OntologyRelation> getRelations()

setRelations

void setRelations(java.util.Set<OntologyRelation> relations)

addRelations

void addRelations(OntologyRelation arg)

getSynonyms

java.util.Set<OntologyTermSynonym> getSynonyms()

setSynonyms

void setSynonyms(java.util.Set<OntologyTermSynonym> synonyms)

addSynonyms

void addSynonyms(OntologyTermSynonym arg)

getOntologyAnnotations

java.util.Set<OntologyAnnotation> getOntologyAnnotations()

setOntologyAnnotations

void setOntologyAnnotations(java.util.Set<OntologyAnnotation> ontologyAnnotations)

addOntologyAnnotations

void addOntologyAnnotations(OntologyAnnotation arg)

getParents

java.util.Set<OntologyTerm> getParents()

setParents

void setParents(java.util.Set<OntologyTerm> parents)

addParents

void addParents(OntologyTerm arg)

getDataSets

java.util.Set<DataSet> getDataSets()

setDataSets

void setDataSets(java.util.Set<DataSet> dataSets)

addDataSets

void addDataSets(DataSet arg)

getCrossReferences

java.util.Set<OntologyTerm> getCrossReferences()

setCrossReferences

void setCrossReferences(java.util.Set<OntologyTerm> crossReferences)

addCrossReferences

void addCrossReferences(OntologyTerm arg)