Package org.intermine.model.bio

Interface SyntenicRegion

All Superinterfaces:

Annotatable, BioEntity, org.intermine.model.FastPathObject, org.intermine.model.InterMineFastPathObject, org.intermine.model.InterMineObject, SequenceFeature

All Known Implementing Classes:

SyntenicRegionShadow

public interface SyntenicRegion
extends SequenceFeature

Method Summary

Modifier and Type	Method	Description
SyntenyBlock	getSyntenyBlock()
org.intermine.model.InterMineObject	proxGetSyntenyBlock()
void	proxySyntenyBlock(org.intermine.objectstore.proxy.ProxyReference syntenyBlock)
void	setSyntenyBlock(SyntenyBlock syntenyBlock)

Methods inherited from interface org.intermine.model.bio.Annotatable

addOntologyAnnotations, addPublications, getOntologyAnnotations, getPrimaryIdentifier, getPublications, setOntologyAnnotations, setPrimaryIdentifier, setPublications

Methods inherited from interface org.intermine.model.bio.BioEntity

addCrossReferences, addDataSets, addLocatedFeatures, addLocations, addSynonyms, getCrossReferences, getDataSets, getLocatedFeatures, getLocations, getName, getOrganism, getSecondaryIdentifier, getSymbol, getSynonyms, proxGetOrganism, proxyOrganism, setCrossReferences, setDataSets, setLocatedFeatures, setLocations, setName, setOrganism, setSecondaryIdentifier, setSymbol, setSynonyms

Methods inherited from interface org.intermine.model.FastPathObject

getFieldProxy, getFieldType, getFieldValue, setFieldValue

Methods inherited from interface org.intermine.model.InterMineObject

getElementType, getId, getoBJECT, setId, setoBJECT, setoBJECT

Methods inherited from interface org.intermine.model.bio.SequenceFeature

addChildFeatures, addOverlappingFeatures, getChildFeatures, getChromosome, getChromosomeLocation, getLength, getOverlappingFeatures, getScore, getScoreType, getSequence, getSequenceOntologyTerm, getStrain, proxGetChromosome, proxGetChromosomeLocation, proxGetSequence, proxGetSequenceOntologyTerm, proxGetStrain, proxyChromosome, proxyChromosomeLocation, proxySequence, proxySequenceOntologyTerm, proxyStrain, setChildFeatures, setChromosome, setChromosomeLocation, setLength, setOverlappingFeatures, setScore, setScoreType, setSequence, setSequenceOntologyTerm, setStrain

Method Detail

getSyntenyBlock

SyntenyBlock getSyntenyBlock()

setSyntenyBlock

void setSyntenyBlock(SyntenyBlock syntenyBlock)

proxySyntenyBlock

void proxySyntenyBlock(org.intermine.objectstore.proxy.ProxyReference syntenyBlock)

proxGetSyntenyBlock

org.intermine.model.InterMineObject proxGetSyntenyBlock()